Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19797 | 59614;59615;59616 | chr2:178592616;178592615;178592614 | chr2:179457343;179457342;179457341 |
N2AB | 18156 | 54691;54692;54693 | chr2:178592616;178592615;178592614 | chr2:179457343;179457342;179457341 |
N2A | 17229 | 51910;51911;51912 | chr2:178592616;178592615;178592614 | chr2:179457343;179457342;179457341 |
N2B | 10732 | 32419;32420;32421 | chr2:178592616;178592615;178592614 | chr2:179457343;179457342;179457341 |
Novex-1 | 10857 | 32794;32795;32796 | chr2:178592616;178592615;178592614 | chr2:179457343;179457342;179457341 |
Novex-2 | 10924 | 32995;32996;32997 | chr2:178592616;178592615;178592614 | chr2:179457343;179457342;179457341 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | rs2050464910 | None | 0.001 | N | 0.125 | 0.094 | 0.18995819373 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Y | rs2050464910 | None | 0.001 | N | 0.125 | 0.094 | 0.18995819373 | gnomAD-4.0.0 | 6.57592E-06 | None | None | None | None | I | None | 2.41324E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4107 | ambiguous | 0.4715 | ambiguous | -0.017 | Destabilizing | 0.055 | N | 0.252 | neutral | None | None | None | None | I |
H/C | 0.2367 | likely_benign | 0.2684 | benign | 0.521 | Stabilizing | 0.958 | D | 0.276 | neutral | None | None | None | None | I |
H/D | 0.469 | ambiguous | 0.5703 | pathogenic | -0.205 | Destabilizing | 0.042 | N | 0.309 | neutral | N | 0.471104221 | None | None | I |
H/E | 0.4266 | ambiguous | 0.5207 | ambiguous | -0.145 | Destabilizing | 0.055 | N | 0.229 | neutral | None | None | None | None | I |
H/F | 0.3437 | ambiguous | 0.3544 | ambiguous | 0.975 | Stabilizing | 0.124 | N | 0.378 | neutral | None | None | None | None | I |
H/G | 0.5529 | ambiguous | 0.6211 | pathogenic | -0.345 | Destabilizing | 0.104 | N | 0.277 | neutral | None | None | None | None | I |
H/I | 0.2703 | likely_benign | 0.3074 | benign | 0.849 | Stabilizing | 0.497 | N | 0.407 | neutral | None | None | None | None | I |
H/K | 0.3067 | likely_benign | 0.4011 | ambiguous | -0.055 | Destabilizing | 0.002 | N | 0.12 | neutral | None | None | None | None | I |
H/L | 0.1346 | likely_benign | 0.1451 | benign | 0.849 | Stabilizing | 0.042 | N | 0.347 | neutral | N | 0.437242364 | None | None | I |
H/M | 0.4308 | ambiguous | 0.4487 | ambiguous | 0.564 | Stabilizing | 0.667 | D | 0.281 | neutral | None | None | None | None | I |
H/N | 0.1557 | likely_benign | 0.153 | benign | -0.145 | Destabilizing | 0.001 | N | 0.114 | neutral | N | 0.454038613 | None | None | I |
H/P | 0.3212 | likely_benign | 0.3853 | ambiguous | 0.585 | Stabilizing | 0.301 | N | 0.373 | neutral | N | 0.482745367 | None | None | I |
H/Q | 0.219 | likely_benign | 0.2541 | benign | 0.034 | Stabilizing | 0.003 | N | 0.151 | neutral | N | 0.473989811 | None | None | I |
H/R | 0.1461 | likely_benign | 0.194 | benign | -0.705 | Destabilizing | 0.042 | N | 0.213 | neutral | N | 0.442552183 | None | None | I |
H/S | 0.3616 | ambiguous | 0.3967 | ambiguous | -0.043 | Destabilizing | 0.055 | N | 0.295 | neutral | None | None | None | None | I |
H/T | 0.3078 | likely_benign | 0.3547 | ambiguous | 0.122 | Stabilizing | 0.22 | N | 0.332 | neutral | None | None | None | None | I |
H/V | 0.2149 | likely_benign | 0.2496 | benign | 0.585 | Stabilizing | 0.22 | N | 0.405 | neutral | None | None | None | None | I |
H/W | 0.4209 | ambiguous | 0.4838 | ambiguous | 1.097 | Stabilizing | 0.883 | D | 0.269 | neutral | None | None | None | None | I |
H/Y | 0.1198 | likely_benign | 0.1271 | benign | 1.259 | Stabilizing | 0.001 | N | 0.125 | neutral | N | 0.462004735 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.