Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19799 | 59620;59621;59622 | chr2:178592610;178592609;178592608 | chr2:179457337;179457336;179457335 |
N2AB | 18158 | 54697;54698;54699 | chr2:178592610;178592609;178592608 | chr2:179457337;179457336;179457335 |
N2A | 17231 | 51916;51917;51918 | chr2:178592610;178592609;178592608 | chr2:179457337;179457336;179457335 |
N2B | 10734 | 32425;32426;32427 | chr2:178592610;178592609;178592608 | chr2:179457337;179457336;179457335 |
Novex-1 | 10859 | 32800;32801;32802 | chr2:178592610;178592609;178592608 | chr2:179457337;179457336;179457335 |
Novex-2 | 10926 | 33001;33002;33003 | chr2:178592610;178592609;178592608 | chr2:179457337;179457336;179457335 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs570087924 | 0.066 | 0.117 | N | 0.37 | 0.126 | 0.192905019026 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
K/N | rs570087924 | 0.066 | 0.117 | N | 0.37 | 0.126 | 0.192905019026 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93798E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs570087924 | 0.066 | 0.117 | N | 0.37 | 0.126 | 0.192905019026 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
K/N | rs570087924 | 0.066 | 0.117 | N | 0.37 | 0.126 | 0.192905019026 | gnomAD-4.0.0 | 6.56935E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.9425E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | None | N | 0.233 | 0.111 | 0.119812018005 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85945E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5821 | likely_pathogenic | 0.4515 | ambiguous | -0.111 | Destabilizing | 0.035 | N | 0.414 | neutral | None | None | None | None | N |
K/C | 0.7746 | likely_pathogenic | 0.6664 | pathogenic | -0.391 | Destabilizing | 0.935 | D | 0.444 | neutral | None | None | None | None | N |
K/D | 0.8985 | likely_pathogenic | 0.8448 | pathogenic | 0.202 | Stabilizing | 0.38 | N | 0.416 | neutral | None | None | None | None | N |
K/E | 0.4752 | ambiguous | 0.3726 | ambiguous | 0.248 | Stabilizing | 0.062 | N | 0.331 | neutral | N | 0.513164275 | None | None | N |
K/F | 0.8434 | likely_pathogenic | 0.7431 | pathogenic | -0.126 | Destabilizing | 0.38 | N | 0.456 | neutral | None | None | None | None | N |
K/G | 0.7228 | likely_pathogenic | 0.5995 | pathogenic | -0.361 | Destabilizing | 0.149 | N | 0.471 | neutral | None | None | None | None | N |
K/H | 0.3978 | ambiguous | 0.3031 | benign | -0.528 | Destabilizing | 0.555 | D | 0.419 | neutral | None | None | None | None | N |
K/I | 0.5546 | ambiguous | 0.4183 | ambiguous | 0.482 | Stabilizing | 0.062 | N | 0.463 | neutral | N | 0.518687524 | None | None | N |
K/L | 0.4182 | ambiguous | 0.2986 | benign | 0.482 | Stabilizing | 0.001 | N | 0.286 | neutral | None | None | None | None | N |
K/M | 0.2729 | likely_benign | 0.2009 | benign | 0.129 | Stabilizing | 0.002 | N | 0.299 | neutral | None | None | None | None | N |
K/N | 0.7337 | likely_pathogenic | 0.626 | pathogenic | -0.022 | Destabilizing | 0.117 | N | 0.37 | neutral | N | 0.51368435 | None | None | N |
K/P | 0.7698 | likely_pathogenic | 0.6775 | pathogenic | 0.314 | Stabilizing | 0.555 | D | 0.429 | neutral | None | None | None | None | N |
K/Q | 0.196 | likely_benign | 0.1449 | benign | -0.117 | Destabilizing | 0.062 | N | 0.38 | neutral | N | 0.50769974 | None | None | N |
K/R | 0.0778 | likely_benign | 0.0687 | benign | -0.147 | Destabilizing | None | N | 0.233 | neutral | N | 0.459831222 | None | None | N |
K/S | 0.7069 | likely_pathogenic | 0.5921 | pathogenic | -0.563 | Destabilizing | 0.149 | N | 0.34 | neutral | None | None | None | None | N |
K/T | 0.3659 | ambiguous | 0.2829 | benign | -0.348 | Destabilizing | 0.117 | N | 0.416 | neutral | N | 0.50435279 | None | None | N |
K/V | 0.4747 | ambiguous | 0.3503 | ambiguous | 0.314 | Stabilizing | 0.081 | N | 0.427 | neutral | None | None | None | None | N |
K/W | 0.8231 | likely_pathogenic | 0.7027 | pathogenic | -0.112 | Destabilizing | 0.935 | D | 0.451 | neutral | None | None | None | None | N |
K/Y | 0.7718 | likely_pathogenic | 0.661 | pathogenic | 0.215 | Stabilizing | 0.555 | D | 0.467 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.