Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19814 | 59665;59666;59667 | chr2:178592565;178592564;178592563 | chr2:179457292;179457291;179457290 |
N2AB | 18173 | 54742;54743;54744 | chr2:178592565;178592564;178592563 | chr2:179457292;179457291;179457290 |
N2A | 17246 | 51961;51962;51963 | chr2:178592565;178592564;178592563 | chr2:179457292;179457291;179457290 |
N2B | 10749 | 32470;32471;32472 | chr2:178592565;178592564;178592563 | chr2:179457292;179457291;179457290 |
Novex-1 | 10874 | 32845;32846;32847 | chr2:178592565;178592564;178592563 | chr2:179457292;179457291;179457290 |
Novex-2 | 10941 | 33046;33047;33048 | chr2:178592565;178592564;178592563 | chr2:179457292;179457291;179457290 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | D | 0.698 | 0.697 | 0.648632380062 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9725 | likely_pathogenic | 0.9794 | pathogenic | -0.724 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | D | 0.572647611 | None | None | I |
P/C | 0.9972 | likely_pathogenic | 0.9974 | pathogenic | -0.611 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
P/D | 0.995 | likely_pathogenic | 0.9962 | pathogenic | -0.627 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
P/E | 0.9959 | likely_pathogenic | 0.9967 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
P/F | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -0.863 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
P/G | 0.9868 | likely_pathogenic | 0.9911 | pathogenic | -0.882 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
P/H | 0.9926 | likely_pathogenic | 0.9943 | pathogenic | -0.452 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
P/I | 0.9936 | likely_pathogenic | 0.9943 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
P/K | 0.996 | likely_pathogenic | 0.9969 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
P/L | 0.9779 | likely_pathogenic | 0.9841 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | D | 0.620600688 | None | None | I |
P/M | 0.9969 | likely_pathogenic | 0.9975 | pathogenic | -0.43 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
P/N | 0.9937 | likely_pathogenic | 0.9956 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
P/Q | 0.9936 | likely_pathogenic | 0.9953 | pathogenic | -0.664 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | D | 0.561291306 | None | None | I |
P/R | 0.987 | likely_pathogenic | 0.9903 | pathogenic | -0.138 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | D | 0.62019708 | None | None | I |
P/S | 0.9894 | likely_pathogenic | 0.9929 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | D | 0.549428021 | None | None | I |
P/T | 0.9814 | likely_pathogenic | 0.9857 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | D | 0.610910494 | None | None | I |
P/V | 0.9876 | likely_pathogenic | 0.9886 | pathogenic | -0.503 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
P/W | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
P/Y | 0.9981 | likely_pathogenic | 0.9984 | pathogenic | -0.684 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.