Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19818 | 59677;59678;59679 | chr2:178592553;178592552;178592551 | chr2:179457280;179457279;179457278 |
N2AB | 18177 | 54754;54755;54756 | chr2:178592553;178592552;178592551 | chr2:179457280;179457279;179457278 |
N2A | 17250 | 51973;51974;51975 | chr2:178592553;178592552;178592551 | chr2:179457280;179457279;179457278 |
N2B | 10753 | 32482;32483;32484 | chr2:178592553;178592552;178592551 | chr2:179457280;179457279;179457278 |
Novex-1 | 10878 | 32857;32858;32859 | chr2:178592553;178592552;178592551 | chr2:179457280;179457279;179457278 |
Novex-2 | 10945 | 33058;33059;33060 | chr2:178592553;178592552;178592551 | chr2:179457280;179457279;179457278 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs1371676567 | -2.593 | 1.0 | D | 0.878 | 0.836 | 0.884655929374 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5977 | likely_pathogenic | 0.6383 | pathogenic | -1.854 | Destabilizing | 0.998 | D | 0.648 | neutral | D | 0.558298404 | None | None | N |
V/C | 0.9156 | likely_pathogenic | 0.9227 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
V/D | 0.9848 | likely_pathogenic | 0.991 | pathogenic | -2.228 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/E | 0.9635 | likely_pathogenic | 0.9758 | pathogenic | -2.051 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.620598893 | None | None | N |
V/F | 0.7898 | likely_pathogenic | 0.8098 | pathogenic | -1.143 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
V/G | 0.7463 | likely_pathogenic | 0.8228 | pathogenic | -2.349 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | D | 0.620598893 | None | None | N |
V/H | 0.9888 | likely_pathogenic | 0.9928 | pathogenic | -2.048 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/I | 0.125 | likely_benign | 0.1139 | benign | -0.503 | Destabilizing | 0.767 | D | 0.282 | neutral | N | 0.479886781 | None | None | N |
V/K | 0.9619 | likely_pathogenic | 0.9778 | pathogenic | -1.661 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/L | 0.7479 | likely_pathogenic | 0.7455 | pathogenic | -0.503 | Destabilizing | 0.981 | D | 0.643 | neutral | D | 0.541593268 | None | None | N |
V/M | 0.6825 | likely_pathogenic | 0.6748 | pathogenic | -0.399 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
V/N | 0.9596 | likely_pathogenic | 0.9729 | pathogenic | -1.836 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/P | 0.9061 | likely_pathogenic | 0.9389 | pathogenic | -0.923 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
V/Q | 0.9599 | likely_pathogenic | 0.9739 | pathogenic | -1.744 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
V/R | 0.9508 | likely_pathogenic | 0.9714 | pathogenic | -1.409 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/S | 0.8861 | likely_pathogenic | 0.9122 | pathogenic | -2.428 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/T | 0.7757 | likely_pathogenic | 0.797 | pathogenic | -2.111 | Highly Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
V/W | 0.9927 | likely_pathogenic | 0.9946 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/Y | 0.9595 | likely_pathogenic | 0.9727 | pathogenic | -1.213 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.