Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19823 | 59692;59693;59694 | chr2:178592538;178592537;178592536 | chr2:179457265;179457264;179457263 |
N2AB | 18182 | 54769;54770;54771 | chr2:178592538;178592537;178592536 | chr2:179457265;179457264;179457263 |
N2A | 17255 | 51988;51989;51990 | chr2:178592538;178592537;178592536 | chr2:179457265;179457264;179457263 |
N2B | 10758 | 32497;32498;32499 | chr2:178592538;178592537;178592536 | chr2:179457265;179457264;179457263 |
Novex-1 | 10883 | 32872;32873;32874 | chr2:178592538;178592537;178592536 | chr2:179457265;179457264;179457263 |
Novex-2 | 10950 | 33073;33074;33075 | chr2:178592538;178592537;178592536 | chr2:179457265;179457264;179457263 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | None | N | 0.188 | 0.071 | 0.104622674875 | gnomAD-4.0.0 | 1.59182E-06 | None | None | None | None | N | None | 0 | 2.28697E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | None | None | 0.117 | N | 0.286 | 0.176 | 0.190952846119 | gnomAD-4.0.0 | 1.59184E-06 | None | None | None | None | N | None | 5.66316E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1466 | likely_benign | 0.1584 | benign | -0.622 | Destabilizing | 0.027 | N | 0.271 | neutral | N | 0.456285832 | None | None | N |
E/C | 0.8099 | likely_pathogenic | 0.8406 | pathogenic | -0.216 | Destabilizing | 0.935 | D | 0.486 | neutral | None | None | None | None | N |
E/D | 0.0966 | likely_benign | 0.1026 | benign | -0.48 | Destabilizing | 0.027 | N | 0.275 | neutral | N | 0.371181503 | None | None | N |
E/F | 0.7766 | likely_pathogenic | 0.8124 | pathogenic | -0.314 | Destabilizing | 0.791 | D | 0.449 | neutral | None | None | None | None | N |
E/G | 0.0763 | likely_benign | 0.0928 | benign | -0.872 | Destabilizing | None | N | 0.188 | neutral | N | 0.431771389 | None | None | N |
E/H | 0.5368 | ambiguous | 0.6117 | pathogenic | -0.226 | Destabilizing | 0.555 | D | 0.304 | neutral | None | None | None | None | N |
E/I | 0.5004 | ambiguous | 0.5535 | ambiguous | 0.021 | Stabilizing | 0.555 | D | 0.462 | neutral | None | None | None | None | N |
E/K | 0.2347 | likely_benign | 0.2997 | benign | 0.036 | Stabilizing | 0.117 | N | 0.286 | neutral | N | 0.471561928 | None | None | N |
E/L | 0.4297 | ambiguous | 0.4665 | ambiguous | 0.021 | Stabilizing | 0.38 | N | 0.429 | neutral | None | None | None | None | N |
E/M | 0.4785 | ambiguous | 0.511 | ambiguous | 0.213 | Stabilizing | 0.935 | D | 0.429 | neutral | None | None | None | None | N |
E/N | 0.1853 | likely_benign | 0.1941 | benign | -0.373 | Destabilizing | 0.001 | N | 0.116 | neutral | None | None | None | None | N |
E/P | 0.7688 | likely_pathogenic | 0.8551 | pathogenic | -0.173 | Destabilizing | 0.555 | D | 0.339 | neutral | None | None | None | None | N |
E/Q | 0.1678 | likely_benign | 0.1911 | benign | -0.305 | Destabilizing | 0.211 | N | 0.333 | neutral | N | 0.465348032 | None | None | N |
E/R | 0.317 | likely_benign | 0.3987 | ambiguous | 0.29 | Stabilizing | 0.262 | N | 0.304 | neutral | None | None | None | None | N |
E/S | 0.2046 | likely_benign | 0.2293 | benign | -0.565 | Destabilizing | 0.035 | N | 0.267 | neutral | None | None | None | None | N |
E/T | 0.3243 | likely_benign | 0.3704 | ambiguous | -0.359 | Destabilizing | 0.149 | N | 0.305 | neutral | None | None | None | None | N |
E/V | 0.2976 | likely_benign | 0.3406 | ambiguous | -0.173 | Destabilizing | 0.484 | N | 0.4 | neutral | N | 0.459403495 | None | None | N |
E/W | 0.8859 | likely_pathogenic | 0.9277 | pathogenic | -0.089 | Destabilizing | 0.935 | D | 0.533 | neutral | None | None | None | None | N |
E/Y | 0.6079 | likely_pathogenic | 0.6722 | pathogenic | -0.065 | Destabilizing | 0.791 | D | 0.428 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.