Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19830 | 59713;59714;59715 | chr2:178592517;178592516;178592515 | chr2:179457244;179457243;179457242 |
N2AB | 18189 | 54790;54791;54792 | chr2:178592517;178592516;178592515 | chr2:179457244;179457243;179457242 |
N2A | 17262 | 52009;52010;52011 | chr2:178592517;178592516;178592515 | chr2:179457244;179457243;179457242 |
N2B | 10765 | 32518;32519;32520 | chr2:178592517;178592516;178592515 | chr2:179457244;179457243;179457242 |
Novex-1 | 10890 | 32893;32894;32895 | chr2:178592517;178592516;178592515 | chr2:179457244;179457243;179457242 |
Novex-2 | 10957 | 33094;33095;33096 | chr2:178592517;178592516;178592515 | chr2:179457244;179457243;179457242 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs764259290 | -0.022 | 0.003 | N | 0.172 | 0.077 | None | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 2.06714E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs764259290 | -0.022 | 0.003 | N | 0.172 | 0.077 | None | gnomAD-3.1.2 | 9.86E-05 | None | None | None | None | N | None | 3.37756E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78011E-04 |
K/R | rs764259290 | -0.022 | 0.003 | N | 0.172 | 0.077 | None | gnomAD-4.0.0 | 2.3068E-05 | None | None | None | None | N | None | 2.8758E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.84479E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2929 | likely_benign | 0.3109 | benign | -0.119 | Destabilizing | 0.775 | D | 0.498 | neutral | None | None | None | None | N |
K/C | 0.7266 | likely_pathogenic | 0.7472 | pathogenic | -0.198 | Destabilizing | 0.996 | D | 0.599 | neutral | None | None | None | None | N |
K/D | 0.4691 | ambiguous | 0.5132 | ambiguous | 0.142 | Stabilizing | 0.923 | D | 0.403 | neutral | None | None | None | None | N |
K/E | 0.2141 | likely_benign | 0.2321 | benign | 0.173 | Stabilizing | 0.722 | D | 0.501 | neutral | N | 0.481912208 | None | None | N |
K/F | 0.7963 | likely_pathogenic | 0.8093 | pathogenic | -0.201 | Destabilizing | 0.987 | D | 0.557 | neutral | None | None | None | None | N |
K/G | 0.3499 | ambiguous | 0.3727 | ambiguous | -0.37 | Destabilizing | 0.775 | D | 0.454 | neutral | None | None | None | None | N |
K/H | 0.3192 | likely_benign | 0.3182 | benign | -0.741 | Destabilizing | 0.961 | D | 0.435 | neutral | None | None | None | None | N |
K/I | 0.4506 | ambiguous | 0.4842 | ambiguous | 0.476 | Stabilizing | 0.949 | D | 0.553 | neutral | N | 0.508618807 | None | None | N |
K/L | 0.4048 | ambiguous | 0.4304 | ambiguous | 0.476 | Stabilizing | 0.775 | D | 0.454 | neutral | None | None | None | None | N |
K/M | 0.2987 | likely_benign | 0.3186 | benign | 0.308 | Stabilizing | 0.996 | D | 0.445 | neutral | None | None | None | None | N |
K/N | 0.3896 | ambiguous | 0.4073 | ambiguous | 0.149 | Stabilizing | 0.722 | D | 0.427 | neutral | N | 0.451589301 | None | None | N |
K/P | 0.6347 | likely_pathogenic | 0.6724 | pathogenic | 0.307 | Stabilizing | 0.961 | D | 0.437 | neutral | None | None | None | None | N |
K/Q | 0.1678 | likely_benign | 0.1743 | benign | -0.006 | Destabilizing | 0.722 | D | 0.475 | neutral | N | 0.487627459 | None | None | N |
K/R | 0.0816 | likely_benign | 0.084 | benign | -0.189 | Destabilizing | 0.003 | N | 0.172 | neutral | N | 0.376747613 | None | None | N |
K/S | 0.3611 | ambiguous | 0.3836 | ambiguous | -0.395 | Destabilizing | 0.775 | D | 0.431 | neutral | None | None | None | None | N |
K/T | 0.1751 | likely_benign | 0.1861 | benign | -0.195 | Destabilizing | 0.722 | D | 0.419 | neutral | N | 0.476351673 | None | None | N |
K/V | 0.3681 | ambiguous | 0.4083 | ambiguous | 0.307 | Stabilizing | 0.923 | D | 0.454 | neutral | None | None | None | None | N |
K/W | 0.776 | likely_pathogenic | 0.7973 | pathogenic | -0.17 | Destabilizing | 0.996 | D | 0.655 | neutral | None | None | None | None | N |
K/Y | 0.6307 | likely_pathogenic | 0.6468 | pathogenic | 0.17 | Stabilizing | 0.987 | D | 0.52 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.