Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19843 | 59752;59753;59754 | chr2:178592478;178592477;178592476 | chr2:179457205;179457204;179457203 |
N2AB | 18202 | 54829;54830;54831 | chr2:178592478;178592477;178592476 | chr2:179457205;179457204;179457203 |
N2A | 17275 | 52048;52049;52050 | chr2:178592478;178592477;178592476 | chr2:179457205;179457204;179457203 |
N2B | 10778 | 32557;32558;32559 | chr2:178592478;178592477;178592476 | chr2:179457205;179457204;179457203 |
Novex-1 | 10903 | 32932;32933;32934 | chr2:178592478;178592477;178592476 | chr2:179457205;179457204;179457203 |
Novex-2 | 10970 | 33133;33134;33135 | chr2:178592478;178592477;178592476 | chr2:179457205;179457204;179457203 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1185186867 | -1.34 | 0.99 | N | 0.621 | 0.341 | 0.415055319159 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/K | rs1185186867 | -1.34 | 0.99 | N | 0.621 | 0.341 | 0.415055319159 | gnomAD-4.0.0 | 5.47452E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19664E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5016 | ambiguous | 0.461 | ambiguous | -1.096 | Destabilizing | 0.98 | D | 0.641 | neutral | N | 0.483237248 | None | None | N |
E/C | 0.9258 | likely_pathogenic | 0.9241 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
E/D | 0.4338 | ambiguous | 0.3846 | ambiguous | -1.574 | Destabilizing | 0.997 | D | 0.595 | neutral | N | 0.493721407 | None | None | N |
E/F | 0.8915 | likely_pathogenic | 0.878 | pathogenic | -0.898 | Destabilizing | 0.991 | D | 0.768 | deleterious | None | None | None | None | N |
E/G | 0.695 | likely_pathogenic | 0.6713 | pathogenic | -1.47 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | N | 0.498494347 | None | None | N |
E/H | 0.7375 | likely_pathogenic | 0.7322 | pathogenic | -1.171 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/I | 0.5141 | ambiguous | 0.4998 | ambiguous | -0.06 | Destabilizing | 0.991 | D | 0.741 | deleterious | None | None | None | None | N |
E/K | 0.6349 | likely_pathogenic | 0.6366 | pathogenic | -1.069 | Destabilizing | 0.99 | D | 0.621 | neutral | N | 0.48874862 | None | None | N |
E/L | 0.6856 | likely_pathogenic | 0.6634 | pathogenic | -0.06 | Destabilizing | 0.971 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/M | 0.6822 | likely_pathogenic | 0.6761 | pathogenic | 0.464 | Stabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
E/N | 0.735 | likely_pathogenic | 0.6953 | pathogenic | -1.344 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
E/P | 0.9951 | likely_pathogenic | 0.9964 | pathogenic | -0.385 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
E/Q | 0.3148 | likely_benign | 0.2996 | benign | -1.197 | Destabilizing | 0.999 | D | 0.671 | neutral | N | 0.481457288 | None | None | N |
E/R | 0.6868 | likely_pathogenic | 0.706 | pathogenic | -0.94 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
E/S | 0.5835 | likely_pathogenic | 0.5446 | ambiguous | -1.848 | Destabilizing | 0.993 | D | 0.622 | neutral | None | None | None | None | N |
E/T | 0.4983 | ambiguous | 0.4787 | ambiguous | -1.516 | Destabilizing | 0.985 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/V | 0.3187 | likely_benign | 0.3043 | benign | -0.385 | Destabilizing | 0.4 | N | 0.531 | neutral | N | 0.473856525 | None | None | N |
E/W | 0.95 | likely_pathogenic | 0.9503 | pathogenic | -0.851 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
E/Y | 0.8587 | likely_pathogenic | 0.8469 | pathogenic | -0.667 | Destabilizing | 0.671 | D | 0.521 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.