Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19852 | 59779;59780;59781 | chr2:178592451;178592450;178592449 | chr2:179457178;179457177;179457176 |
N2AB | 18211 | 54856;54857;54858 | chr2:178592451;178592450;178592449 | chr2:179457178;179457177;179457176 |
N2A | 17284 | 52075;52076;52077 | chr2:178592451;178592450;178592449 | chr2:179457178;179457177;179457176 |
N2B | 10787 | 32584;32585;32586 | chr2:178592451;178592450;178592449 | chr2:179457178;179457177;179457176 |
Novex-1 | 10912 | 32959;32960;32961 | chr2:178592451;178592450;178592449 | chr2:179457178;179457177;179457176 |
Novex-2 | 10979 | 33160;33161;33162 | chr2:178592451;178592450;178592449 | chr2:179457178;179457177;179457176 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs746700153 | -0.384 | 0.885 | N | 0.481 | 0.241 | 0.267299060538 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
G/S | rs746700153 | -0.384 | 0.885 | N | 0.481 | 0.241 | 0.267299060538 | gnomAD-4.0.0 | 2.05299E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79918E-06 | 1.15964E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1143 | likely_benign | 0.1099 | benign | -0.736 | Destabilizing | 0.046 | N | 0.28 | neutral | N | 0.425715861 | None | None | N |
G/C | 0.2743 | likely_benign | 0.2592 | benign | -0.897 | Destabilizing | 0.046 | N | 0.48 | neutral | N | 0.472664446 | None | None | N |
G/D | 0.6452 | likely_pathogenic | 0.6667 | pathogenic | -1.252 | Destabilizing | 0.991 | D | 0.701 | prob.neutral | N | 0.487881828 | None | None | N |
G/E | 0.5115 | ambiguous | 0.536 | ambiguous | -1.256 | Destabilizing | 0.986 | D | 0.751 | deleterious | None | None | None | None | N |
G/F | 0.8293 | likely_pathogenic | 0.8324 | pathogenic | -0.97 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
G/H | 0.6355 | likely_pathogenic | 0.6558 | pathogenic | -1.535 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
G/I | 0.5713 | likely_pathogenic | 0.5978 | pathogenic | -0.145 | Destabilizing | 0.986 | D | 0.785 | deleterious | None | None | None | None | N |
G/K | 0.6043 | likely_pathogenic | 0.6656 | pathogenic | -1.273 | Destabilizing | 0.986 | D | 0.74 | deleterious | None | None | None | None | N |
G/L | 0.7102 | likely_pathogenic | 0.7012 | pathogenic | -0.145 | Destabilizing | 0.986 | D | 0.687 | prob.neutral | None | None | None | None | N |
G/M | 0.6725 | likely_pathogenic | 0.6623 | pathogenic | -0.109 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
G/N | 0.5844 | likely_pathogenic | 0.5648 | pathogenic | -1.02 | Destabilizing | 0.993 | D | 0.597 | neutral | None | None | None | None | N |
G/P | 0.9707 | likely_pathogenic | 0.9781 | pathogenic | -0.298 | Destabilizing | 0.993 | D | 0.753 | deleterious | None | None | None | None | N |
G/Q | 0.4984 | ambiguous | 0.5155 | ambiguous | -1.105 | Destabilizing | 0.993 | D | 0.762 | deleterious | None | None | None | None | N |
G/R | 0.4216 | ambiguous | 0.4748 | ambiguous | -1.071 | Destabilizing | 0.991 | D | 0.755 | deleterious | N | 0.46839199 | None | None | N |
G/S | 0.1083 | likely_benign | 0.0963 | benign | -1.334 | Destabilizing | 0.885 | D | 0.481 | neutral | N | 0.364782046 | None | None | N |
G/T | 0.22 | likely_benign | 0.2184 | benign | -1.242 | Destabilizing | 0.986 | D | 0.66 | neutral | None | None | None | None | N |
G/V | 0.413 | ambiguous | 0.4344 | ambiguous | -0.298 | Destabilizing | 0.964 | D | 0.71 | prob.delet. | N | 0.492634287 | None | None | N |
G/W | 0.6959 | likely_pathogenic | 0.7243 | pathogenic | -1.457 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
G/Y | 0.7148 | likely_pathogenic | 0.7171 | pathogenic | -0.98 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.