Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19888 | 59887;59888;59889 | chr2:178592242;178592241;178592240 | chr2:179456969;179456968;179456967 |
N2AB | 18247 | 54964;54965;54966 | chr2:178592242;178592241;178592240 | chr2:179456969;179456968;179456967 |
N2A | 17320 | 52183;52184;52185 | chr2:178592242;178592241;178592240 | chr2:179456969;179456968;179456967 |
N2B | 10823 | 32692;32693;32694 | chr2:178592242;178592241;178592240 | chr2:179456969;179456968;179456967 |
Novex-1 | 10948 | 33067;33068;33069 | chr2:178592242;178592241;178592240 | chr2:179456969;179456968;179456967 |
Novex-2 | 11015 | 33268;33269;33270 | chr2:178592242;178592241;178592240 | chr2:179456969;179456968;179456967 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs564006895 | -0.89 | 0.896 | D | 0.558 | 0.403 | 0.365509141856 | gnomAD-2.1.1 | 1.64E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.83E-05 | 3.37268E-04 |
E/A | rs564006895 | -0.89 | 0.896 | D | 0.558 | 0.403 | 0.365509141856 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/A | rs564006895 | -0.89 | 0.896 | D | 0.558 | 0.403 | 0.365509141856 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
E/A | rs564006895 | -0.89 | 0.896 | D | 0.558 | 0.403 | 0.365509141856 | gnomAD-4.0.0 | 1.42704E-05 | None | None | None | None | N | None | 0 | 1.6733E-05 | None | 0 | 0 | None | 1.56647E-05 | 0 | 1.78131E-05 | 0 | 0 |
E/K | rs369279578 | 0.227 | 0.896 | N | 0.533 | 0.345 | None | gnomAD-2.1.1 | 1.23E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.31E-05 | None | 0 | 1.83E-05 | 0 |
E/K | rs369279578 | 0.227 | 0.896 | N | 0.533 | 0.345 | None | gnomAD-4.0.0 | 6.85213E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.10174E-06 | 1.16344E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.49 | ambiguous | 0.4859 | ambiguous | -0.453 | Destabilizing | 0.896 | D | 0.558 | neutral | D | 0.523887409 | None | None | N |
E/C | 0.9633 | likely_pathogenic | 0.9604 | pathogenic | -0.348 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/D | 0.1856 | likely_benign | 0.1576 | benign | -0.543 | Destabilizing | 0.004 | N | 0.116 | neutral | N | 0.426128788 | None | None | N |
E/F | 0.9487 | likely_pathogenic | 0.9489 | pathogenic | 0.24 | Stabilizing | 0.996 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/G | 0.5062 | ambiguous | 0.5035 | ambiguous | -0.749 | Destabilizing | 0.896 | D | 0.582 | neutral | N | 0.468027876 | None | None | N |
E/H | 0.8214 | likely_pathogenic | 0.8218 | pathogenic | 0.519 | Stabilizing | 0.996 | D | 0.553 | neutral | None | None | None | None | N |
E/I | 0.8301 | likely_pathogenic | 0.8262 | pathogenic | 0.331 | Stabilizing | 0.988 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/K | 0.603 | likely_pathogenic | 0.6025 | pathogenic | 0.248 | Stabilizing | 0.896 | D | 0.533 | neutral | N | 0.518905663 | None | None | N |
E/L | 0.8418 | likely_pathogenic | 0.8356 | pathogenic | 0.331 | Stabilizing | 0.988 | D | 0.657 | neutral | None | None | None | None | N |
E/M | 0.8248 | likely_pathogenic | 0.8228 | pathogenic | 0.331 | Stabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
E/N | 0.5123 | ambiguous | 0.4864 | ambiguous | -0.559 | Destabilizing | 0.851 | D | 0.521 | neutral | None | None | None | None | N |
E/P | 0.9742 | likely_pathogenic | 0.9707 | pathogenic | 0.09 | Stabilizing | 0.988 | D | 0.579 | neutral | None | None | None | None | N |
E/Q | 0.3855 | ambiguous | 0.3911 | ambiguous | -0.416 | Destabilizing | 0.946 | D | 0.536 | neutral | N | 0.473485606 | None | None | N |
E/R | 0.7417 | likely_pathogenic | 0.744 | pathogenic | 0.633 | Stabilizing | 0.988 | D | 0.557 | neutral | None | None | None | None | N |
E/S | 0.516 | ambiguous | 0.5042 | ambiguous | -0.706 | Destabilizing | 0.919 | D | 0.509 | neutral | None | None | None | None | N |
E/T | 0.6442 | likely_pathogenic | 0.6355 | pathogenic | -0.432 | Destabilizing | 0.959 | D | 0.568 | neutral | None | None | None | None | N |
E/V | 0.6658 | likely_pathogenic | 0.6636 | pathogenic | 0.09 | Stabilizing | 0.984 | D | 0.583 | neutral | N | 0.483689823 | None | None | N |
E/W | 0.9831 | likely_pathogenic | 0.9814 | pathogenic | 0.564 | Stabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/Y | 0.8948 | likely_pathogenic | 0.8887 | pathogenic | 0.54 | Stabilizing | 0.996 | D | 0.664 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.