Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1990259929;59930;59931 chr2:178592200;178592199;178592198chr2:179456927;179456926;179456925
N2AB1826155006;55007;55008 chr2:178592200;178592199;178592198chr2:179456927;179456926;179456925
N2A1733452225;52226;52227 chr2:178592200;178592199;178592198chr2:179456927;179456926;179456925
N2B1083732734;32735;32736 chr2:178592200;178592199;178592198chr2:179456927;179456926;179456925
Novex-11096233109;33110;33111 chr2:178592200;178592199;178592198chr2:179456927;179456926;179456925
Novex-21102933310;33311;33312 chr2:178592200;178592199;178592198chr2:179456927;179456926;179456925
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTG
  • RefSeq wild type template codon: GAC
  • Domain: Fn3-32
  • Domain position: 26
  • Structural Position: 28
  • Q(SASA): 0.6691
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/V None None 0.771 N 0.375 0.08 0.241078983079 gnomAD-4.0.0 1.59503E-06 None None None None I None 0 0 None 0 0 None 0 0 2.863E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.0786 likely_benign 0.0711 benign -0.451 Destabilizing 0.688 D 0.327 neutral None None None None I
L/C 0.4121 ambiguous 0.3538 ambiguous -0.689 Destabilizing 0.998 D 0.33 neutral None None None None I
L/D 0.2201 likely_benign 0.224 benign -0.295 Destabilizing 0.525 D 0.353 neutral None None None None I
L/E 0.1179 likely_benign 0.1139 benign -0.394 Destabilizing 0.002 N 0.211 neutral None None None None I
L/F 0.1191 likely_benign 0.1097 benign -0.583 Destabilizing 0.991 D 0.324 neutral None None None None I
L/G 0.2299 likely_benign 0.206 benign -0.569 Destabilizing 0.842 D 0.377 neutral None None None None I
L/H 0.1484 likely_benign 0.1364 benign 0.116 Stabilizing 0.974 D 0.349 neutral None None None None I
L/I 0.0751 likely_benign 0.0719 benign -0.268 Destabilizing 0.915 D 0.347 neutral None None None None I
L/K 0.1314 likely_benign 0.1288 benign -0.311 Destabilizing 0.525 D 0.333 neutral None None None None I
L/M 0.095 likely_benign 0.0845 benign -0.503 Destabilizing 0.989 D 0.332 neutral N 0.480251275 None None I
L/N 0.1402 likely_benign 0.1353 benign -0.144 Destabilizing 0.842 D 0.377 neutral None None None None I
L/P 0.1349 likely_benign 0.1183 benign -0.299 Destabilizing 0.966 D 0.369 neutral N 0.439460658 None None I
L/Q 0.0859 likely_benign 0.0757 benign -0.36 Destabilizing 0.669 D 0.365 neutral N 0.455680904 None None I
L/R 0.1349 likely_benign 0.1291 benign 0.214 Stabilizing 0.801 D 0.373 neutral N 0.432457328 None None I
L/S 0.0935 likely_benign 0.0897 benign -0.524 Destabilizing 0.842 D 0.345 neutral None None None None I
L/T 0.0875 likely_benign 0.0794 benign -0.521 Destabilizing 0.842 D 0.355 neutral None None None None I
L/V 0.0686 likely_benign 0.062 benign -0.299 Destabilizing 0.771 D 0.375 neutral N 0.435825707 None None I
L/W 0.2105 likely_benign 0.1995 benign -0.598 Destabilizing 0.998 D 0.389 neutral None None None None I
L/Y 0.2402 likely_benign 0.2331 benign -0.354 Destabilizing 0.991 D 0.321 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.