Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19902 | 59929;59930;59931 | chr2:178592200;178592199;178592198 | chr2:179456927;179456926;179456925 |
N2AB | 18261 | 55006;55007;55008 | chr2:178592200;178592199;178592198 | chr2:179456927;179456926;179456925 |
N2A | 17334 | 52225;52226;52227 | chr2:178592200;178592199;178592198 | chr2:179456927;179456926;179456925 |
N2B | 10837 | 32734;32735;32736 | chr2:178592200;178592199;178592198 | chr2:179456927;179456926;179456925 |
Novex-1 | 10962 | 33109;33110;33111 | chr2:178592200;178592199;178592198 | chr2:179456927;179456926;179456925 |
Novex-2 | 11029 | 33310;33311;33312 | chr2:178592200;178592199;178592198 | chr2:179456927;179456926;179456925 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.771 | N | 0.375 | 0.08 | 0.241078983079 | gnomAD-4.0.0 | 1.59503E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.863E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0786 | likely_benign | 0.0711 | benign | -0.451 | Destabilizing | 0.688 | D | 0.327 | neutral | None | None | None | None | I |
L/C | 0.4121 | ambiguous | 0.3538 | ambiguous | -0.689 | Destabilizing | 0.998 | D | 0.33 | neutral | None | None | None | None | I |
L/D | 0.2201 | likely_benign | 0.224 | benign | -0.295 | Destabilizing | 0.525 | D | 0.353 | neutral | None | None | None | None | I |
L/E | 0.1179 | likely_benign | 0.1139 | benign | -0.394 | Destabilizing | 0.002 | N | 0.211 | neutral | None | None | None | None | I |
L/F | 0.1191 | likely_benign | 0.1097 | benign | -0.583 | Destabilizing | 0.991 | D | 0.324 | neutral | None | None | None | None | I |
L/G | 0.2299 | likely_benign | 0.206 | benign | -0.569 | Destabilizing | 0.842 | D | 0.377 | neutral | None | None | None | None | I |
L/H | 0.1484 | likely_benign | 0.1364 | benign | 0.116 | Stabilizing | 0.974 | D | 0.349 | neutral | None | None | None | None | I |
L/I | 0.0751 | likely_benign | 0.0719 | benign | -0.268 | Destabilizing | 0.915 | D | 0.347 | neutral | None | None | None | None | I |
L/K | 0.1314 | likely_benign | 0.1288 | benign | -0.311 | Destabilizing | 0.525 | D | 0.333 | neutral | None | None | None | None | I |
L/M | 0.095 | likely_benign | 0.0845 | benign | -0.503 | Destabilizing | 0.989 | D | 0.332 | neutral | N | 0.480251275 | None | None | I |
L/N | 0.1402 | likely_benign | 0.1353 | benign | -0.144 | Destabilizing | 0.842 | D | 0.377 | neutral | None | None | None | None | I |
L/P | 0.1349 | likely_benign | 0.1183 | benign | -0.299 | Destabilizing | 0.966 | D | 0.369 | neutral | N | 0.439460658 | None | None | I |
L/Q | 0.0859 | likely_benign | 0.0757 | benign | -0.36 | Destabilizing | 0.669 | D | 0.365 | neutral | N | 0.455680904 | None | None | I |
L/R | 0.1349 | likely_benign | 0.1291 | benign | 0.214 | Stabilizing | 0.801 | D | 0.373 | neutral | N | 0.432457328 | None | None | I |
L/S | 0.0935 | likely_benign | 0.0897 | benign | -0.524 | Destabilizing | 0.842 | D | 0.345 | neutral | None | None | None | None | I |
L/T | 0.0875 | likely_benign | 0.0794 | benign | -0.521 | Destabilizing | 0.842 | D | 0.355 | neutral | None | None | None | None | I |
L/V | 0.0686 | likely_benign | 0.062 | benign | -0.299 | Destabilizing | 0.771 | D | 0.375 | neutral | N | 0.435825707 | None | None | I |
L/W | 0.2105 | likely_benign | 0.1995 | benign | -0.598 | Destabilizing | 0.998 | D | 0.389 | neutral | None | None | None | None | I |
L/Y | 0.2402 | likely_benign | 0.2331 | benign | -0.354 | Destabilizing | 0.991 | D | 0.321 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.