Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19914 | 59965;59966;59967 | chr2:178592164;178592163;178592162 | chr2:179456891;179456890;179456889 |
N2AB | 18273 | 55042;55043;55044 | chr2:178592164;178592163;178592162 | chr2:179456891;179456890;179456889 |
N2A | 17346 | 52261;52262;52263 | chr2:178592164;178592163;178592162 | chr2:179456891;179456890;179456889 |
N2B | 10849 | 32770;32771;32772 | chr2:178592164;178592163;178592162 | chr2:179456891;179456890;179456889 |
Novex-1 | 10974 | 33145;33146;33147 | chr2:178592164;178592163;178592162 | chr2:179456891;179456890;179456889 |
Novex-2 | 11041 | 33346;33347;33348 | chr2:178592164;178592163;178592162 | chr2:179456891;179456890;179456889 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.334 | D | 0.615 | 0.51 | 0.638558423614 | gnomAD-4.0.0 | 1.59322E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8603E-06 | 0 | 0 |
V/I | rs1663045607 | None | 0.002 | N | 0.277 | 0.084 | 0.389283895039 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.66E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1663045607 | None | 0.002 | N | 0.277 | 0.084 | 0.389283895039 | gnomAD-4.0.0 | 4.34038E-06 | None | None | None | None | N | None | 6.67842E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69566E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6628 | likely_pathogenic | 0.6393 | pathogenic | -2.427 | Highly Destabilizing | 0.334 | N | 0.615 | neutral | D | 0.552668981 | None | None | N |
V/C | 0.9391 | likely_pathogenic | 0.9411 | pathogenic | -2.055 | Highly Destabilizing | 0.982 | D | 0.787 | deleterious | None | None | None | None | N |
V/D | 0.9948 | likely_pathogenic | 0.995 | pathogenic | -3.279 | Highly Destabilizing | 0.781 | D | 0.895 | deleterious | D | 0.55342945 | None | None | N |
V/E | 0.9818 | likely_pathogenic | 0.9837 | pathogenic | -2.998 | Highly Destabilizing | 0.826 | D | 0.883 | deleterious | None | None | None | None | N |
V/F | 0.728 | likely_pathogenic | 0.7593 | pathogenic | -1.364 | Destabilizing | 0.638 | D | 0.809 | deleterious | D | 0.55317596 | None | None | N |
V/G | 0.9037 | likely_pathogenic | 0.9017 | pathogenic | -3.018 | Highly Destabilizing | 0.781 | D | 0.898 | deleterious | D | 0.55342945 | None | None | N |
V/H | 0.9941 | likely_pathogenic | 0.9951 | pathogenic | -2.802 | Highly Destabilizing | 0.982 | D | 0.874 | deleterious | None | None | None | None | N |
V/I | 0.0759 | likely_benign | 0.0804 | benign | -0.729 | Destabilizing | 0.002 | N | 0.277 | neutral | N | 0.487932182 | None | None | N |
V/K | 0.9879 | likely_pathogenic | 0.9902 | pathogenic | -1.968 | Destabilizing | 0.826 | D | 0.885 | deleterious | None | None | None | None | N |
V/L | 0.3552 | ambiguous | 0.4042 | ambiguous | -0.729 | Destabilizing | 0.034 | N | 0.506 | neutral | D | 0.53007238 | None | None | N |
V/M | 0.4562 | ambiguous | 0.48 | ambiguous | -0.969 | Destabilizing | 0.7 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/N | 0.983 | likely_pathogenic | 0.9849 | pathogenic | -2.509 | Highly Destabilizing | 0.935 | D | 0.902 | deleterious | None | None | None | None | N |
V/P | 0.9829 | likely_pathogenic | 0.9841 | pathogenic | -1.274 | Destabilizing | 0.935 | D | 0.886 | deleterious | None | None | None | None | N |
V/Q | 0.9796 | likely_pathogenic | 0.9814 | pathogenic | -2.234 | Highly Destabilizing | 0.935 | D | 0.898 | deleterious | None | None | None | None | N |
V/R | 0.9793 | likely_pathogenic | 0.9826 | pathogenic | -1.917 | Destabilizing | 0.826 | D | 0.905 | deleterious | None | None | None | None | N |
V/S | 0.9222 | likely_pathogenic | 0.924 | pathogenic | -3.103 | Highly Destabilizing | 0.826 | D | 0.885 | deleterious | None | None | None | None | N |
V/T | 0.696 | likely_pathogenic | 0.6898 | pathogenic | -2.67 | Highly Destabilizing | 0.399 | N | 0.69 | prob.neutral | None | None | None | None | N |
V/W | 0.9907 | likely_pathogenic | 0.9921 | pathogenic | -1.945 | Destabilizing | 0.982 | D | 0.842 | deleterious | None | None | None | None | N |
V/Y | 0.9736 | likely_pathogenic | 0.9785 | pathogenic | -1.62 | Destabilizing | 0.826 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.