Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19921 | 59986;59987;59988 | chr2:178592143;178592142;178592141 | chr2:179456870;179456869;179456868 |
N2AB | 18280 | 55063;55064;55065 | chr2:178592143;178592142;178592141 | chr2:179456870;179456869;179456868 |
N2A | 17353 | 52282;52283;52284 | chr2:178592143;178592142;178592141 | chr2:179456870;179456869;179456868 |
N2B | 10856 | 32791;32792;32793 | chr2:178592143;178592142;178592141 | chr2:179456870;179456869;179456868 |
Novex-1 | 10981 | 33166;33167;33168 | chr2:178592143;178592142;178592141 | chr2:179456870;179456869;179456868 |
Novex-2 | 11048 | 33367;33368;33369 | chr2:178592143;178592142;178592141 | chr2:179456870;179456869;179456868 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs749120617 | -0.343 | None | N | 0.121 | 0.124 | 0.0884992946249 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
S/T | rs749120617 | -0.343 | None | N | 0.121 | 0.124 | 0.0884992946249 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/T | rs749120617 | -0.343 | None | N | 0.121 | 0.124 | 0.0884992946249 | gnomAD-4.0.0 | 2.4802E-06 | None | None | None | None | N | None | 4.00812E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.09837E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0688 | likely_benign | 0.0672 | benign | -0.337 | Destabilizing | 0.002 | N | 0.155 | neutral | None | None | None | None | N |
S/C | 0.1245 | likely_benign | 0.1093 | benign | -0.296 | Destabilizing | 0.78 | D | 0.274 | neutral | N | 0.514417831 | None | None | N |
S/D | 0.3375 | likely_benign | 0.3075 | benign | -0.104 | Destabilizing | 0.081 | N | 0.287 | neutral | None | None | None | None | N |
S/E | 0.4142 | ambiguous | 0.3991 | ambiguous | -0.212 | Destabilizing | 0.149 | N | 0.304 | neutral | None | None | None | None | N |
S/F | 0.1923 | likely_benign | 0.2085 | benign | -0.956 | Destabilizing | 0.555 | D | 0.343 | neutral | None | None | None | None | N |
S/G | 0.0888 | likely_benign | 0.064 | benign | -0.426 | Destabilizing | None | N | 0.141 | neutral | N | 0.50624301 | None | None | N |
S/H | 0.2754 | likely_benign | 0.2752 | benign | -0.897 | Destabilizing | 0.824 | D | 0.262 | neutral | None | None | None | None | N |
S/I | 0.1736 | likely_benign | 0.1685 | benign | -0.234 | Destabilizing | 0.188 | N | 0.362 | neutral | N | 0.514164341 | None | None | N |
S/K | 0.454 | ambiguous | 0.4472 | ambiguous | -0.551 | Destabilizing | 0.149 | N | 0.321 | neutral | None | None | None | None | N |
S/L | 0.0885 | likely_benign | 0.0919 | benign | -0.234 | Destabilizing | 0.081 | N | 0.312 | neutral | None | None | None | None | N |
S/M | 0.149 | likely_benign | 0.1316 | benign | 0.044 | Stabilizing | 0.824 | D | 0.259 | neutral | None | None | None | None | N |
S/N | 0.1132 | likely_benign | 0.0984 | benign | -0.251 | Destabilizing | None | N | 0.201 | neutral | N | 0.499087751 | None | None | N |
S/P | 0.6285 | likely_pathogenic | 0.5913 | pathogenic | -0.241 | Destabilizing | 0.555 | D | 0.293 | neutral | None | None | None | None | N |
S/Q | 0.3673 | ambiguous | 0.3521 | ambiguous | -0.553 | Destabilizing | 0.555 | D | 0.297 | neutral | None | None | None | None | N |
S/R | 0.4117 | ambiguous | 0.4094 | ambiguous | -0.263 | Destabilizing | 0.541 | D | 0.301 | neutral | N | 0.474384095 | None | None | N |
S/T | 0.0717 | likely_benign | 0.0648 | benign | -0.363 | Destabilizing | None | N | 0.121 | neutral | N | 0.47926984 | None | None | N |
S/V | 0.146 | likely_benign | 0.1358 | benign | -0.241 | Destabilizing | 0.081 | N | 0.352 | neutral | None | None | None | None | N |
S/W | 0.3489 | ambiguous | 0.3453 | ambiguous | -0.964 | Destabilizing | 0.935 | D | 0.496 | neutral | None | None | None | None | N |
S/Y | 0.1884 | likely_benign | 0.2011 | benign | -0.694 | Destabilizing | 0.555 | D | 0.341 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.