Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19923 | 59992;59993;59994 | chr2:178592137;178592136;178592135 | chr2:179456864;179456863;179456862 |
N2AB | 18282 | 55069;55070;55071 | chr2:178592137;178592136;178592135 | chr2:179456864;179456863;179456862 |
N2A | 17355 | 52288;52289;52290 | chr2:178592137;178592136;178592135 | chr2:179456864;179456863;179456862 |
N2B | 10858 | 32797;32798;32799 | chr2:178592137;178592136;178592135 | chr2:179456864;179456863;179456862 |
Novex-1 | 10983 | 33172;33173;33174 | chr2:178592137;178592136;178592135 | chr2:179456864;179456863;179456862 |
Novex-2 | 11050 | 33373;33374;33375 | chr2:178592137;178592136;178592135 | chr2:179456864;179456863;179456862 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs2050348587 | None | 0.484 | N | 0.308 | 0.101 | 0.268660756437 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/H | rs2050348587 | None | 0.484 | N | 0.308 | 0.101 | 0.268660756437 | gnomAD-4.0.0 | 6.57947E-06 | None | None | None | None | I | None | 0 | 6.55566E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.136 | likely_benign | 0.1309 | benign | -0.122 | Destabilizing | 0.035 | N | 0.342 | neutral | None | None | None | None | I |
Q/C | 0.4725 | ambiguous | 0.4616 | ambiguous | -0.103 | Destabilizing | 0.935 | D | 0.375 | neutral | None | None | None | None | I |
Q/D | 0.2532 | likely_benign | 0.2317 | benign | -0.102 | Destabilizing | 0.081 | N | 0.303 | neutral | None | None | None | None | I |
Q/E | 0.081 | likely_benign | 0.0739 | benign | -0.154 | Destabilizing | None | N | 0.207 | neutral | N | 0.447578709 | None | None | I |
Q/F | 0.5023 | ambiguous | 0.4775 | ambiguous | -0.519 | Destabilizing | 0.791 | D | 0.344 | neutral | None | None | None | None | I |
Q/G | 0.2008 | likely_benign | 0.1879 | benign | -0.233 | Destabilizing | 0.149 | N | 0.324 | neutral | None | None | None | None | I |
Q/H | 0.1427 | likely_benign | 0.1345 | benign | 0.014 | Stabilizing | 0.484 | N | 0.308 | neutral | N | 0.446850777 | None | None | I |
Q/I | 0.2307 | likely_benign | 0.2249 | benign | 0.072 | Stabilizing | 0.555 | D | 0.349 | neutral | None | None | None | None | I |
Q/K | 0.0795 | likely_benign | 0.0786 | benign | -0.001 | Destabilizing | 0.002 | N | 0.213 | neutral | N | 0.47338123 | None | None | I |
Q/L | 0.1003 | likely_benign | 0.0965 | benign | 0.072 | Stabilizing | 0.117 | N | 0.329 | neutral | N | 0.474074664 | None | None | I |
Q/M | 0.2695 | likely_benign | 0.2606 | benign | 0.057 | Stabilizing | 0.791 | D | 0.307 | neutral | None | None | None | None | I |
Q/N | 0.1806 | likely_benign | 0.1721 | benign | -0.282 | Destabilizing | 0.149 | N | 0.317 | neutral | None | None | None | None | I |
Q/P | 0.2075 | likely_benign | 0.2057 | benign | 0.031 | Stabilizing | 0.484 | N | 0.325 | neutral | N | 0.504050854 | None | None | I |
Q/R | 0.0909 | likely_benign | 0.0877 | benign | 0.223 | Stabilizing | None | N | 0.241 | neutral | N | 0.455411545 | None | None | I |
Q/S | 0.1555 | likely_benign | 0.1499 | benign | -0.264 | Destabilizing | 0.081 | N | 0.317 | neutral | None | None | None | None | I |
Q/T | 0.1271 | likely_benign | 0.1214 | benign | -0.189 | Destabilizing | 0.149 | N | 0.339 | neutral | None | None | None | None | I |
Q/V | 0.1542 | likely_benign | 0.1503 | benign | 0.031 | Stabilizing | 0.149 | N | 0.343 | neutral | None | None | None | None | I |
Q/W | 0.4544 | ambiguous | 0.4377 | ambiguous | -0.585 | Destabilizing | 0.935 | D | 0.401 | neutral | None | None | None | None | I |
Q/Y | 0.3238 | likely_benign | 0.3227 | benign | -0.295 | Destabilizing | 0.791 | D | 0.311 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.