Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19947 | 60064;60065;60066 | chr2:178592065;178592064;178592063 | chr2:179456792;179456791;179456790 |
N2AB | 18306 | 55141;55142;55143 | chr2:178592065;178592064;178592063 | chr2:179456792;179456791;179456790 |
N2A | 17379 | 52360;52361;52362 | chr2:178592065;178592064;178592063 | chr2:179456792;179456791;179456790 |
N2B | 10882 | 32869;32870;32871 | chr2:178592065;178592064;178592063 | chr2:179456792;179456791;179456790 |
Novex-1 | 11007 | 33244;33245;33246 | chr2:178592065;178592064;178592063 | chr2:179456792;179456791;179456790 |
Novex-2 | 11074 | 33445;33446;33447 | chr2:178592065;178592064;178592063 | chr2:179456792;179456791;179456790 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1288648449 | -2.615 | 0.999 | D | 0.792 | 0.849 | 0.830803960569 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/H | rs1288648449 | -2.615 | 0.999 | D | 0.792 | 0.849 | 0.830803960569 | gnomAD-4.0.0 | 1.59292E-06 | None | None | None | None | N | None | 0 | 2.29032E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9916 | likely_pathogenic | 0.993 | pathogenic | -3.705 | Highly Destabilizing | 0.992 | D | 0.859 | deleterious | None | None | None | None | N |
Y/C | 0.8888 | likely_pathogenic | 0.9098 | pathogenic | -2.215 | Highly Destabilizing | 0.391 | N | 0.764 | deleterious | D | 0.672935895 | None | None | N |
Y/D | 0.9885 | likely_pathogenic | 0.9937 | pathogenic | -3.785 | Highly Destabilizing | 0.999 | D | 0.901 | deleterious | D | 0.672935895 | None | None | N |
Y/E | 0.9968 | likely_pathogenic | 0.998 | pathogenic | -3.613 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
Y/F | 0.1735 | likely_benign | 0.1739 | benign | -1.426 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | D | 0.629562184 | None | None | N |
Y/G | 0.985 | likely_pathogenic | 0.9892 | pathogenic | -4.077 | Highly Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
Y/H | 0.9256 | likely_pathogenic | 0.9447 | pathogenic | -2.46 | Highly Destabilizing | 0.999 | D | 0.792 | deleterious | D | 0.647397783 | None | None | N |
Y/I | 0.904 | likely_pathogenic | 0.921 | pathogenic | -2.451 | Highly Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
Y/K | 0.9969 | likely_pathogenic | 0.9983 | pathogenic | -2.493 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
Y/L | 0.9032 | likely_pathogenic | 0.8926 | pathogenic | -2.451 | Highly Destabilizing | 0.992 | D | 0.807 | deleterious | None | None | None | None | N |
Y/M | 0.9572 | likely_pathogenic | 0.9571 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
Y/N | 0.9339 | likely_pathogenic | 0.9549 | pathogenic | -3.119 | Highly Destabilizing | 0.999 | D | 0.88 | deleterious | D | 0.67273409 | None | None | N |
Y/P | 0.9987 | likely_pathogenic | 0.9993 | pathogenic | -2.885 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
Y/Q | 0.9937 | likely_pathogenic | 0.9953 | pathogenic | -2.972 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/R | 0.9923 | likely_pathogenic | 0.9952 | pathogenic | -1.994 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Y/S | 0.9736 | likely_pathogenic | 0.98 | pathogenic | -3.497 | Highly Destabilizing | 0.998 | D | 0.86 | deleterious | D | 0.656916534 | None | None | N |
Y/T | 0.9861 | likely_pathogenic | 0.9898 | pathogenic | -3.223 | Highly Destabilizing | 0.999 | D | 0.87 | deleterious | None | None | None | None | N |
Y/V | 0.859 | likely_pathogenic | 0.8791 | pathogenic | -2.885 | Highly Destabilizing | 0.992 | D | 0.822 | deleterious | None | None | None | None | N |
Y/W | 0.822 | likely_pathogenic | 0.8387 | pathogenic | -0.711 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.