Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19948 | 60067;60068;60069 | chr2:178592062;178592061;178592060 | chr2:179456789;179456788;179456787 |
N2AB | 18307 | 55144;55145;55146 | chr2:178592062;178592061;178592060 | chr2:179456789;179456788;179456787 |
N2A | 17380 | 52363;52364;52365 | chr2:178592062;178592061;178592060 | chr2:179456789;179456788;179456787 |
N2B | 10883 | 32872;32873;32874 | chr2:178592062;178592061;178592060 | chr2:179456789;179456788;179456787 |
Novex-1 | 11008 | 33247;33248;33249 | chr2:178592062;178592061;178592060 | chr2:179456789;179456788;179456787 |
Novex-2 | 11075 | 33448;33449;33450 | chr2:178592062;178592061;178592060 | chr2:179456789;179456788;179456787 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.317 | N | 0.696 | 0.128 | 0.481246930725 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3247 | likely_benign | 0.3059 | benign | -2.555 | Highly Destabilizing | 0.035 | N | 0.67 | neutral | None | None | None | None | N |
L/C | 0.3812 | ambiguous | 0.3846 | ambiguous | -1.443 | Destabilizing | 0.824 | D | 0.697 | prob.neutral | None | None | None | None | N |
L/D | 0.8099 | likely_pathogenic | 0.7864 | pathogenic | -3.078 | Highly Destabilizing | 0.38 | N | 0.756 | deleterious | None | None | None | None | N |
L/E | 0.4718 | ambiguous | 0.4378 | ambiguous | -2.804 | Highly Destabilizing | 0.38 | N | 0.757 | deleterious | None | None | None | None | N |
L/F | 0.1059 | likely_benign | 0.1071 | benign | -1.474 | Destabilizing | 0.317 | N | 0.696 | prob.neutral | N | 0.473362588 | None | None | N |
L/G | 0.6962 | likely_pathogenic | 0.66 | pathogenic | -3.087 | Highly Destabilizing | 0.149 | N | 0.739 | prob.delet. | None | None | None | None | N |
L/H | 0.1991 | likely_benign | 0.1972 | benign | -2.731 | Highly Destabilizing | 0.915 | D | 0.757 | deleterious | N | 0.503992139 | None | None | N |
L/I | 0.0861 | likely_benign | 0.0877 | benign | -0.97 | Destabilizing | 0.009 | N | 0.611 | neutral | N | 0.462241517 | None | None | N |
L/K | 0.3332 | likely_benign | 0.3076 | benign | -1.779 | Destabilizing | 0.149 | N | 0.725 | prob.delet. | None | None | None | None | N |
L/M | 0.1106 | likely_benign | 0.1075 | benign | -0.991 | Destabilizing | 0.007 | N | 0.461 | neutral | None | None | None | None | N |
L/N | 0.5052 | ambiguous | 0.4822 | ambiguous | -2.289 | Highly Destabilizing | 0.38 | N | 0.756 | deleterious | None | None | None | None | N |
L/P | 0.968 | likely_pathogenic | 0.9685 | pathogenic | -1.488 | Destabilizing | 0.484 | N | 0.767 | deleterious | N | 0.485104947 | None | None | N |
L/Q | 0.1736 | likely_benign | 0.1625 | benign | -2.035 | Highly Destabilizing | 0.555 | D | 0.732 | prob.delet. | None | None | None | None | N |
L/R | 0.2281 | likely_benign | 0.2149 | benign | -1.713 | Destabilizing | 0.484 | N | 0.731 | prob.delet. | N | 0.428782304 | None | None | N |
L/S | 0.3163 | likely_benign | 0.3086 | benign | -2.822 | Highly Destabilizing | 0.007 | N | 0.614 | neutral | None | None | None | None | N |
L/T | 0.2441 | likely_benign | 0.2311 | benign | -2.418 | Highly Destabilizing | 0.002 | N | 0.542 | neutral | None | None | None | None | N |
L/V | 0.0906 | likely_benign | 0.0891 | benign | -1.488 | Destabilizing | None | N | 0.332 | neutral | N | 0.427800869 | None | None | N |
L/W | 0.2447 | likely_benign | 0.2477 | benign | -1.923 | Destabilizing | 0.935 | D | 0.718 | prob.delet. | None | None | None | None | N |
L/Y | 0.25 | likely_benign | 0.247 | benign | -1.664 | Destabilizing | 0.555 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.