Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19965 | 60118;60119;60120 | chr2:178592011;178592010;178592009 | chr2:179456738;179456737;179456736 |
N2AB | 18324 | 55195;55196;55197 | chr2:178592011;178592010;178592009 | chr2:179456738;179456737;179456736 |
N2A | 17397 | 52414;52415;52416 | chr2:178592011;178592010;178592009 | chr2:179456738;179456737;179456736 |
N2B | 10900 | 32923;32924;32925 | chr2:178592011;178592010;178592009 | chr2:179456738;179456737;179456736 |
Novex-1 | 11025 | 33298;33299;33300 | chr2:178592011;178592010;178592009 | chr2:179456738;179456737;179456736 |
Novex-2 | 11092 | 33499;33500;33501 | chr2:178592011;178592010;178592009 | chr2:179456738;179456737;179456736 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs372266703 | 0.287 | 0.028 | N | 0.485 | 0.097 | None | gnomAD-2.1.1 | 1.08E-05 | None | None | None | None | N | None | 1.24028E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs372266703 | 0.287 | 0.028 | N | 0.485 | 0.097 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs372266703 | 0.287 | 0.028 | N | 0.485 | 0.097 | None | gnomAD-4.0.0 | 3.04514E-06 | None | None | None | None | N | None | 5.24329E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2534 | likely_benign | 0.2405 | benign | -0.713 | Destabilizing | 0.622 | D | 0.554 | neutral | N | 0.51414763 | None | None | N |
T/C | 0.6909 | likely_pathogenic | 0.6642 | pathogenic | -0.515 | Destabilizing | 0.998 | D | 0.692 | prob.delet. | None | None | None | None | N |
T/D | 0.8912 | likely_pathogenic | 0.8911 | pathogenic | -0.918 | Destabilizing | 0.991 | D | 0.731 | deleterious | None | None | None | None | N |
T/E | 0.8867 | likely_pathogenic | 0.8873 | pathogenic | -0.74 | Destabilizing | 0.991 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/F | 0.6596 | likely_pathogenic | 0.6588 | pathogenic | -0.317 | Destabilizing | 0.949 | D | 0.778 | deleterious | None | None | None | None | N |
T/G | 0.4968 | ambiguous | 0.4974 | ambiguous | -1.118 | Destabilizing | 0.991 | D | 0.71 | prob.delet. | None | None | None | None | N |
T/H | 0.8215 | likely_pathogenic | 0.81 | pathogenic | -1.329 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
T/I | 0.3368 | likely_benign | 0.3323 | benign | 0.337 | Stabilizing | 0.028 | N | 0.485 | neutral | N | 0.481843211 | None | None | N |
T/K | 0.8533 | likely_pathogenic | 0.8452 | pathogenic | -0.496 | Destabilizing | 0.966 | D | 0.715 | prob.delet. | N | 0.462299749 | None | None | N |
T/L | 0.1453 | likely_benign | 0.1454 | benign | 0.337 | Stabilizing | 0.016 | N | 0.431 | neutral | None | None | None | None | N |
T/M | 0.1233 | likely_benign | 0.1185 | benign | 0.13 | Stabilizing | 0.949 | D | 0.668 | prob.neutral | None | None | None | None | N |
T/N | 0.4475 | ambiguous | 0.4256 | ambiguous | -1.024 | Destabilizing | 0.991 | D | 0.692 | prob.delet. | None | None | None | None | N |
T/P | 0.7145 | likely_pathogenic | 0.6898 | pathogenic | 0.02 | Stabilizing | 0.989 | D | 0.732 | deleterious | N | 0.428643444 | None | None | N |
T/Q | 0.796 | likely_pathogenic | 0.7867 | pathogenic | -0.778 | Destabilizing | 0.991 | D | 0.689 | prob.delet. | None | None | None | None | N |
T/R | 0.8742 | likely_pathogenic | 0.869 | pathogenic | -0.749 | Destabilizing | 0.989 | D | 0.728 | deleterious | N | 0.46204626 | None | None | N |
T/S | 0.2679 | likely_benign | 0.2576 | benign | -1.218 | Destabilizing | 0.89 | D | 0.584 | neutral | N | 0.503199918 | None | None | N |
T/V | 0.306 | likely_benign | 0.2978 | benign | 0.02 | Stabilizing | 0.522 | D | 0.575 | neutral | None | None | None | None | N |
T/W | 0.9406 | likely_pathogenic | 0.9376 | pathogenic | -0.533 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
T/Y | 0.7765 | likely_pathogenic | 0.7683 | pathogenic | -0.126 | Destabilizing | 0.991 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.