Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19969 | 60130;60131;60132 | chr2:178591999;178591998;178591997 | chr2:179456726;179456725;179456724 |
N2AB | 18328 | 55207;55208;55209 | chr2:178591999;178591998;178591997 | chr2:179456726;179456725;179456724 |
N2A | 17401 | 52426;52427;52428 | chr2:178591999;178591998;178591997 | chr2:179456726;179456725;179456724 |
N2B | 10904 | 32935;32936;32937 | chr2:178591999;178591998;178591997 | chr2:179456726;179456725;179456724 |
Novex-1 | 11029 | 33310;33311;33312 | chr2:178591999;178591998;178591997 | chr2:179456726;179456725;179456724 |
Novex-2 | 11096 | 33511;33512;33513 | chr2:178591999;178591998;178591997 | chr2:179456726;179456725;179456724 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1232358158 | -1.214 | 0.881 | N | 0.431 | 0.069 | 0.43965937752 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 8.93E-06 | 0 |
I/V | rs1232358158 | -1.214 | 0.881 | N | 0.431 | 0.069 | 0.43965937752 | gnomAD-4.0.0 | 3.42329E-06 | None | None | None | None | N | None | 0 | 2.24296E-05 | None | 0 | 0 | None | 3.74784E-05 | 0 | 1.79945E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5999 | likely_pathogenic | 0.6066 | pathogenic | -2.237 | Highly Destabilizing | 0.982 | D | 0.599 | neutral | None | None | None | None | N |
I/C | 0.7541 | likely_pathogenic | 0.7629 | pathogenic | -1.368 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
I/D | 0.9638 | likely_pathogenic | 0.9755 | pathogenic | -2.466 | Highly Destabilizing | 0.997 | D | 0.806 | deleterious | None | None | None | None | N |
I/E | 0.8341 | likely_pathogenic | 0.8764 | pathogenic | -2.277 | Highly Destabilizing | 0.997 | D | 0.797 | deleterious | None | None | None | None | N |
I/F | 0.2705 | likely_benign | 0.2677 | benign | -1.354 | Destabilizing | 0.999 | D | 0.626 | neutral | N | 0.506202938 | None | None | N |
I/G | 0.8896 | likely_pathogenic | 0.8948 | pathogenic | -2.716 | Highly Destabilizing | 0.997 | D | 0.785 | deleterious | None | None | None | None | N |
I/H | 0.8011 | likely_pathogenic | 0.8347 | pathogenic | -1.936 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
I/K | 0.6841 | likely_pathogenic | 0.7462 | pathogenic | -1.803 | Destabilizing | 0.997 | D | 0.806 | deleterious | None | None | None | None | N |
I/L | 0.1559 | likely_benign | 0.1524 | benign | -0.877 | Destabilizing | 0.944 | D | 0.454 | neutral | N | 0.504642713 | None | None | N |
I/M | 0.16 | likely_benign | 0.156 | benign | -0.683 | Destabilizing | 0.999 | D | 0.563 | neutral | N | 0.487867893 | None | None | N |
I/N | 0.7516 | likely_pathogenic | 0.8178 | pathogenic | -2.085 | Highly Destabilizing | 0.997 | D | 0.846 | deleterious | N | 0.506723013 | None | None | N |
I/P | 0.9685 | likely_pathogenic | 0.976 | pathogenic | -1.31 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
I/Q | 0.6807 | likely_pathogenic | 0.7353 | pathogenic | -2.027 | Highly Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
I/R | 0.6129 | likely_pathogenic | 0.6898 | pathogenic | -1.396 | Destabilizing | 0.997 | D | 0.846 | deleterious | None | None | None | None | N |
I/S | 0.6782 | likely_pathogenic | 0.7261 | pathogenic | -2.714 | Highly Destabilizing | 0.954 | D | 0.733 | deleterious | N | 0.505856221 | None | None | N |
I/T | 0.4505 | ambiguous | 0.5191 | ambiguous | -2.387 | Highly Destabilizing | 0.355 | N | 0.395 | neutral | N | 0.505682863 | None | None | N |
I/V | 0.066 | likely_benign | 0.0641 | benign | -1.31 | Destabilizing | 0.881 | D | 0.431 | neutral | N | 0.455734045 | None | None | N |
I/W | 0.881 | likely_pathogenic | 0.8977 | pathogenic | -1.666 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
I/Y | 0.7239 | likely_pathogenic | 0.7624 | pathogenic | -1.354 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.