Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19987 | 60184;60185;60186 | chr2:178591860;178591859;178591858 | chr2:179456587;179456586;179456585 |
N2AB | 18346 | 55261;55262;55263 | chr2:178591860;178591859;178591858 | chr2:179456587;179456586;179456585 |
N2A | 17419 | 52480;52481;52482 | chr2:178591860;178591859;178591858 | chr2:179456587;179456586;179456585 |
N2B | 10922 | 32989;32990;32991 | chr2:178591860;178591859;178591858 | chr2:179456587;179456586;179456585 |
Novex-1 | 11047 | 33364;33365;33366 | chr2:178591860;178591859;178591858 | chr2:179456587;179456586;179456585 |
Novex-2 | 11114 | 33565;33566;33567 | chr2:178591860;178591859;178591858 | chr2:179456587;179456586;179456585 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | rs2050279012 | None | 0.062 | N | 0.411 | 0.174 | 0.387850303812 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1739 | likely_benign | 0.1636 | benign | -1.069 | Destabilizing | 0.027 | N | 0.335 | neutral | N | 0.488003966 | None | None | N |
V/C | 0.7625 | likely_pathogenic | 0.7814 | pathogenic | -0.43 | Destabilizing | 0.935 | D | 0.421 | neutral | None | None | None | None | N |
V/D | 0.4028 | ambiguous | 0.391 | ambiguous | -1.078 | Destabilizing | 0.001 | N | 0.338 | neutral | None | None | None | None | N |
V/E | 0.2946 | likely_benign | 0.2718 | benign | -1.157 | Destabilizing | 0.062 | N | 0.411 | neutral | N | 0.458681137 | None | None | N |
V/F | 0.2731 | likely_benign | 0.2462 | benign | -1.085 | Destabilizing | 0.38 | N | 0.465 | neutral | None | None | None | None | N |
V/G | 0.2689 | likely_benign | 0.2534 | benign | -1.289 | Destabilizing | 0.117 | N | 0.448 | neutral | N | 0.482944863 | None | None | N |
V/H | 0.5962 | likely_pathogenic | 0.5624 | ambiguous | -0.905 | Destabilizing | 0.935 | D | 0.417 | neutral | None | None | None | None | N |
V/I | 0.0854 | likely_benign | 0.0794 | benign | -0.598 | Destabilizing | None | N | 0.087 | neutral | N | 0.483886226 | None | None | N |
V/K | 0.2715 | likely_benign | 0.2467 | benign | -0.89 | Destabilizing | 0.149 | N | 0.436 | neutral | None | None | None | None | N |
V/L | 0.3005 | likely_benign | 0.2569 | benign | -0.598 | Destabilizing | 0.009 | N | 0.327 | neutral | N | 0.436921785 | None | None | N |
V/M | 0.1726 | likely_benign | 0.1508 | benign | -0.303 | Destabilizing | 0.38 | N | 0.426 | neutral | None | None | None | None | N |
V/N | 0.3311 | likely_benign | 0.3071 | benign | -0.477 | Destabilizing | 0.149 | N | 0.449 | neutral | None | None | None | None | N |
V/P | 0.9165 | likely_pathogenic | 0.908 | pathogenic | -0.72 | Destabilizing | 0.555 | D | 0.448 | neutral | None | None | None | None | N |
V/Q | 0.2906 | likely_benign | 0.2761 | benign | -0.749 | Destabilizing | 0.555 | D | 0.451 | neutral | None | None | None | None | N |
V/R | 0.2451 | likely_benign | 0.2343 | benign | -0.28 | Destabilizing | 0.555 | D | 0.477 | neutral | None | None | None | None | N |
V/S | 0.2211 | likely_benign | 0.214 | benign | -0.826 | Destabilizing | 0.007 | N | 0.322 | neutral | None | None | None | None | N |
V/T | 0.1322 | likely_benign | 0.1277 | benign | -0.815 | Destabilizing | 0.001 | N | 0.085 | neutral | None | None | None | None | N |
V/W | 0.8496 | likely_pathogenic | 0.8302 | pathogenic | -1.221 | Destabilizing | 0.935 | D | 0.486 | neutral | None | None | None | None | N |
V/Y | 0.6481 | likely_pathogenic | 0.6253 | pathogenic | -0.953 | Destabilizing | 0.555 | D | 0.455 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.