Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19988 | 60187;60188;60189 | chr2:178591857;178591856;178591855 | chr2:179456584;179456583;179456582 |
N2AB | 18347 | 55264;55265;55266 | chr2:178591857;178591856;178591855 | chr2:179456584;179456583;179456582 |
N2A | 17420 | 52483;52484;52485 | chr2:178591857;178591856;178591855 | chr2:179456584;179456583;179456582 |
N2B | 10923 | 32992;32993;32994 | chr2:178591857;178591856;178591855 | chr2:179456584;179456583;179456582 |
Novex-1 | 11048 | 33367;33368;33369 | chr2:178591857;178591856;178591855 | chr2:179456584;179456583;179456582 |
Novex-2 | 11115 | 33568;33569;33570 | chr2:178591857;178591856;178591855 | chr2:179456584;179456583;179456582 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 1.0 | N | 0.711 | 0.546 | 0.461759001683 | gnomAD-4.0.0 | 3.18477E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88267E-05 | 0 | 0 | 0 | 3.02627E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5088 | ambiguous | 0.4075 | ambiguous | -0.431 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.518614875 | None | None | N |
D/C | 0.933 | likely_pathogenic | 0.9257 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
D/E | 0.5652 | likely_pathogenic | 0.4624 | ambiguous | -0.497 | Destabilizing | 1.0 | D | 0.381 | neutral | N | 0.447541423 | None | None | N |
D/F | 0.8838 | likely_pathogenic | 0.8636 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
D/G | 0.5977 | likely_pathogenic | 0.4991 | ambiguous | -0.709 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.4725341 | None | None | N |
D/H | 0.7514 | likely_pathogenic | 0.7069 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.606 | neutral | N | 0.489210004 | None | None | N |
D/I | 0.8192 | likely_pathogenic | 0.7719 | pathogenic | 0.279 | Stabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
D/K | 0.8854 | likely_pathogenic | 0.8542 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
D/L | 0.7788 | likely_pathogenic | 0.729 | pathogenic | 0.279 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
D/M | 0.9087 | likely_pathogenic | 0.88 | pathogenic | 0.52 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
D/N | 0.3322 | likely_benign | 0.2582 | benign | -0.604 | Destabilizing | 1.0 | D | 0.63 | neutral | N | 0.500490474 | None | None | N |
D/P | 0.9912 | likely_pathogenic | 0.9902 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
D/Q | 0.8103 | likely_pathogenic | 0.7628 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
D/R | 0.8498 | likely_pathogenic | 0.8215 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
D/S | 0.4291 | ambiguous | 0.3369 | benign | -0.798 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
D/T | 0.6662 | likely_pathogenic | 0.579 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
D/V | 0.6406 | likely_pathogenic | 0.5601 | ambiguous | 0.067 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.483827953 | None | None | N |
D/W | 0.97 | likely_pathogenic | 0.9705 | pathogenic | -0.071 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
D/Y | 0.6246 | likely_pathogenic | 0.6063 | pathogenic | None | Stabilizing | 1.0 | D | 0.617 | neutral | N | 0.48344956 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.