Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20010 | 60253;60254;60255 | chr2:178591791;178591790;178591789 | chr2:179456518;179456517;179456516 |
N2AB | 18369 | 55330;55331;55332 | chr2:178591791;178591790;178591789 | chr2:179456518;179456517;179456516 |
N2A | 17442 | 52549;52550;52551 | chr2:178591791;178591790;178591789 | chr2:179456518;179456517;179456516 |
N2B | 10945 | 33058;33059;33060 | chr2:178591791;178591790;178591789 | chr2:179456518;179456517;179456516 |
Novex-1 | 11070 | 33433;33434;33435 | chr2:178591791;178591790;178591789 | chr2:179456518;179456517;179456516 |
Novex-2 | 11137 | 33634;33635;33636 | chr2:178591791;178591790;178591789 | chr2:179456518;179456517;179456516 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 1.0 | D | 0.838 | 0.54 | 0.60587874566 | gnomAD-4.0.0 | 1.59233E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02627E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1458 | likely_benign | 0.1572 | benign | -0.387 | Destabilizing | 0.999 | D | 0.579 | neutral | N | 0.485197533 | None | None | I |
T/C | 0.5729 | likely_pathogenic | 0.6057 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
T/D | 0.5939 | likely_pathogenic | 0.6131 | pathogenic | 0.172 | Stabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
T/E | 0.4322 | ambiguous | 0.4405 | ambiguous | 0.101 | Stabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
T/F | 0.4196 | ambiguous | 0.4366 | ambiguous | -0.803 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
T/G | 0.38 | ambiguous | 0.4011 | ambiguous | -0.534 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
T/H | 0.3625 | ambiguous | 0.3811 | ambiguous | -0.804 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
T/I | 0.212 | likely_benign | 0.2398 | benign | -0.117 | Destabilizing | 1.0 | D | 0.846 | deleterious | N | 0.515097354 | None | None | I |
T/K | 0.1866 | likely_benign | 0.19 | benign | -0.378 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
T/L | 0.1205 | likely_benign | 0.1352 | benign | -0.117 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | I |
T/M | 0.1188 | likely_benign | 0.1277 | benign | 0.086 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
T/N | 0.1936 | likely_benign | 0.2062 | benign | -0.166 | Destabilizing | 1.0 | D | 0.832 | deleterious | N | 0.488502442 | None | None | I |
T/P | 0.5564 | ambiguous | 0.6129 | pathogenic | -0.178 | Destabilizing | 1.0 | D | 0.838 | deleterious | D | 0.529270083 | None | None | I |
T/Q | 0.2713 | likely_benign | 0.2874 | benign | -0.413 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
T/R | 0.1767 | likely_benign | 0.1936 | benign | -0.08 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
T/S | 0.1545 | likely_benign | 0.1589 | benign | -0.407 | Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.482003501 | None | None | I |
T/V | 0.1815 | likely_benign | 0.1986 | benign | -0.178 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | I |
T/W | 0.7313 | likely_pathogenic | 0.7498 | pathogenic | -0.779 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
T/Y | 0.4601 | ambiguous | 0.4838 | ambiguous | -0.509 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.