Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20019 | 60280;60281;60282 | chr2:178591764;178591763;178591762 | chr2:179456491;179456490;179456489 |
N2AB | 18378 | 55357;55358;55359 | chr2:178591764;178591763;178591762 | chr2:179456491;179456490;179456489 |
N2A | 17451 | 52576;52577;52578 | chr2:178591764;178591763;178591762 | chr2:179456491;179456490;179456489 |
N2B | 10954 | 33085;33086;33087 | chr2:178591764;178591763;178591762 | chr2:179456491;179456490;179456489 |
Novex-1 | 11079 | 33460;33461;33462 | chr2:178591764;178591763;178591762 | chr2:179456491;179456490;179456489 |
Novex-2 | 11146 | 33661;33662;33663 | chr2:178591764;178591763;178591762 | chr2:179456491;179456490;179456489 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.645 | N | 0.638 | 0.316 | 0.430694319191 | gnomAD-4.0.0 | 6.8439E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15958E-05 | 0 |
E/D | rs1342395614 | None | 0.002 | N | 0.278 | 0.064 | 0.0954503805726 | gnomAD-4.0.0 | 6.84391E-06 | None | None | None | None | N | None | 0 | 2.23784E-05 | None | 0 | 0 | None | 0 | 0 | 7.19695E-06 | 0 | 1.657E-05 |
E/G | rs1301342171 | None | 0.645 | N | 0.587 | 0.293 | 0.464953486513 | gnomAD-4.0.0 | 6.8439E-06 | None | None | None | None | N | None | 0 | 2.23784E-05 | None | 0 | 0 | None | 0 | 0 | 5.39764E-06 | 2.31916E-05 | 1.65706E-05 |
E/K | rs201487340 | 0.19 | 0.645 | N | 0.605 | 0.267 | None | gnomAD-2.1.1 | 1.49528E-03 | None | None | None | None | N | None | 1.57982E-02 | 7.36961E-04 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 3.92E-05 | 5.62746E-04 |
E/K | rs201487340 | 0.19 | 0.645 | N | 0.605 | 0.267 | None | gnomAD-3.1.2 | 4.11157E-03 | None | None | None | None | N | None | 1.45333E-02 | 9.84252E-04 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 2.87081E-03 |
E/K | rs201487340 | 0.19 | 0.645 | N | 0.605 | 0.267 | None | 1000 genomes | 1.79712E-03 | None | None | None | None | N | None | 6.8E-03 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs201487340 | 0.19 | 0.645 | N | 0.605 | 0.267 | None | gnomAD-4.0.0 | 7.9093E-04 | None | None | None | None | N | None | 1.54946E-02 | 7.00631E-04 | None | 0 | 0 | None | 0 | 1.65125E-04 | 1.1021E-05 | 2.19626E-05 | 8.96603E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1376 | likely_benign | 0.1129 | benign | -0.66 | Destabilizing | 0.645 | D | 0.638 | neutral | N | 0.4752481 | None | None | N |
E/C | 0.8758 | likely_pathogenic | 0.8578 | pathogenic | -0.268 | Destabilizing | 0.995 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/D | 0.1308 | likely_benign | 0.1036 | benign | -0.844 | Destabilizing | 0.002 | N | 0.278 | neutral | N | 0.478557764 | None | None | N |
E/F | 0.7835 | likely_pathogenic | 0.7224 | pathogenic | -0.448 | Destabilizing | 0.995 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/G | 0.2446 | likely_benign | 0.1904 | benign | -0.939 | Destabilizing | 0.645 | D | 0.587 | neutral | N | 0.481118066 | None | None | N |
E/H | 0.5953 | likely_pathogenic | 0.5208 | ambiguous | -0.595 | Destabilizing | 0.995 | D | 0.587 | neutral | None | None | None | None | N |
E/I | 0.3217 | likely_benign | 0.2686 | benign | 0.07 | Stabilizing | 0.945 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/K | 0.2648 | likely_benign | 0.2044 | benign | -0.291 | Destabilizing | 0.645 | D | 0.605 | neutral | N | 0.418528025 | None | None | N |
E/L | 0.4183 | ambiguous | 0.3482 | ambiguous | 0.07 | Stabilizing | 0.945 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/M | 0.4811 | ambiguous | 0.4173 | ambiguous | 0.367 | Stabilizing | 0.995 | D | 0.666 | neutral | None | None | None | None | N |
E/N | 0.2863 | likely_benign | 0.2217 | benign | -0.591 | Destabilizing | 0.809 | D | 0.592 | neutral | None | None | None | None | N |
E/P | 0.594 | likely_pathogenic | 0.5245 | ambiguous | -0.152 | Destabilizing | 0.945 | D | 0.633 | neutral | None | None | None | None | N |
E/Q | 0.2377 | likely_benign | 0.207 | benign | -0.532 | Destabilizing | 0.864 | D | 0.551 | neutral | N | 0.508899313 | None | None | N |
E/R | 0.4512 | ambiguous | 0.3975 | ambiguous | -0.075 | Destabilizing | 0.894 | D | 0.623 | neutral | None | None | None | None | N |
E/S | 0.2537 | likely_benign | 0.1999 | benign | -0.815 | Destabilizing | 0.547 | D | 0.607 | neutral | None | None | None | None | N |
E/T | 0.2582 | likely_benign | 0.2054 | benign | -0.597 | Destabilizing | 0.894 | D | 0.591 | neutral | None | None | None | None | N |
E/V | 0.1939 | likely_benign | 0.1613 | benign | -0.152 | Destabilizing | 0.928 | D | 0.668 | neutral | N | 0.444021116 | None | None | N |
E/W | 0.9239 | likely_pathogenic | 0.9035 | pathogenic | -0.28 | Destabilizing | 0.995 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/Y | 0.6553 | likely_pathogenic | 0.5828 | pathogenic | -0.219 | Destabilizing | 0.995 | D | 0.661 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.