Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20023 | 60292;60293;60294 | chr2:178591752;178591751;178591750 | chr2:179456479;179456478;179456477 |
N2AB | 18382 | 55369;55370;55371 | chr2:178591752;178591751;178591750 | chr2:179456479;179456478;179456477 |
N2A | 17455 | 52588;52589;52590 | chr2:178591752;178591751;178591750 | chr2:179456479;179456478;179456477 |
N2B | 10958 | 33097;33098;33099 | chr2:178591752;178591751;178591750 | chr2:179456479;179456478;179456477 |
Novex-1 | 11083 | 33472;33473;33474 | chr2:178591752;178591751;178591750 | chr2:179456479;179456478;179456477 |
Novex-2 | 11150 | 33673;33674;33675 | chr2:178591752;178591751;178591750 | chr2:179456479;179456478;179456477 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs2050254249 | None | 0.014 | N | 0.334 | 0.077 | 0.210429274316 | gnomAD-4.0.0 | 1.59211E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.7804E-05 | None | 0 | 0 | 0 | 0 | 0 |
D/V | None | None | 0.942 | N | 0.715 | 0.441 | 0.391930172978 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1414 | likely_benign | 0.1409 | benign | -0.29 | Destabilizing | 0.698 | D | 0.535 | neutral | N | 0.465340537 | None | None | N |
D/C | 0.5674 | likely_pathogenic | 0.6081 | pathogenic | -0.194 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
D/E | 0.1046 | likely_benign | 0.0996 | benign | -0.235 | Destabilizing | 0.014 | N | 0.334 | neutral | N | 0.419624103 | None | None | N |
D/F | 0.5734 | likely_pathogenic | 0.5909 | pathogenic | -0.194 | Destabilizing | 0.998 | D | 0.698 | prob.neutral | None | None | None | None | N |
D/G | 0.1349 | likely_benign | 0.1408 | benign | -0.471 | Destabilizing | 0.822 | D | 0.507 | neutral | N | 0.467263335 | None | None | N |
D/H | 0.2283 | likely_benign | 0.2429 | benign | 0.161 | Stabilizing | 0.992 | D | 0.521 | neutral | N | 0.483715654 | None | None | N |
D/I | 0.3013 | likely_benign | 0.3145 | benign | 0.136 | Stabilizing | 0.978 | D | 0.715 | prob.delet. | None | None | None | None | N |
D/K | 0.2351 | likely_benign | 0.2497 | benign | 0.117 | Stabilizing | 0.754 | D | 0.493 | neutral | None | None | None | None | N |
D/L | 0.3251 | likely_benign | 0.3385 | benign | 0.136 | Stabilizing | 0.956 | D | 0.714 | prob.delet. | None | None | None | None | N |
D/M | 0.5154 | ambiguous | 0.5209 | ambiguous | 0.107 | Stabilizing | 0.998 | D | 0.714 | prob.delet. | None | None | None | None | N |
D/N | 0.0877 | likely_benign | 0.0882 | benign | -0.106 | Destabilizing | 0.126 | N | 0.372 | neutral | N | 0.476922968 | None | None | N |
D/P | 0.5804 | likely_pathogenic | 0.5969 | pathogenic | 0.015 | Stabilizing | 0.978 | D | 0.517 | neutral | None | None | None | None | N |
D/Q | 0.2167 | likely_benign | 0.2232 | benign | -0.072 | Destabilizing | 0.915 | D | 0.492 | neutral | None | None | None | None | N |
D/R | 0.3009 | likely_benign | 0.3299 | benign | 0.406 | Stabilizing | 0.956 | D | 0.645 | neutral | None | None | None | None | N |
D/S | 0.1205 | likely_benign | 0.1207 | benign | -0.252 | Destabilizing | 0.754 | D | 0.463 | neutral | None | None | None | None | N |
D/T | 0.176 | likely_benign | 0.1791 | benign | -0.112 | Destabilizing | 0.956 | D | 0.492 | neutral | None | None | None | None | N |
D/V | 0.1723 | likely_benign | 0.181 | benign | 0.015 | Stabilizing | 0.942 | D | 0.715 | prob.delet. | N | 0.475096171 | None | None | N |
D/W | 0.8252 | likely_pathogenic | 0.8512 | pathogenic | -0.066 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
D/Y | 0.2259 | likely_benign | 0.2504 | benign | 0.034 | Stabilizing | 0.997 | D | 0.697 | prob.neutral | N | 0.476790516 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.