Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20034 | 60325;60326;60327 | chr2:178591719;178591718;178591717 | chr2:179456446;179456445;179456444 |
N2AB | 18393 | 55402;55403;55404 | chr2:178591719;178591718;178591717 | chr2:179456446;179456445;179456444 |
N2A | 17466 | 52621;52622;52623 | chr2:178591719;178591718;178591717 | chr2:179456446;179456445;179456444 |
N2B | 10969 | 33130;33131;33132 | chr2:178591719;178591718;178591717 | chr2:179456446;179456445;179456444 |
Novex-1 | 11094 | 33505;33506;33507 | chr2:178591719;178591718;178591717 | chr2:179456446;179456445;179456444 |
Novex-2 | 11161 | 33706;33707;33708 | chr2:178591719;178591718;178591717 | chr2:179456446;179456445;179456444 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | None | N | 0.201 | 0.058 | 0.117506650769 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.94099E-04 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/G | None | None | 0.124 | N | 0.555 | 0.112 | 0.223146558224 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
E/Q | rs746056036 | -0.624 | 0.497 | N | 0.566 | 0.159 | 0.234412748748 | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.47377E-04 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs746056036 | -0.624 | 0.497 | N | 0.566 | 0.159 | 0.234412748748 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94553E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs746056036 | -0.624 | 0.497 | N | 0.566 | 0.159 | 0.234412748748 | gnomAD-4.0.0 | 5.57843E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.01117E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1402 | likely_benign | 0.136 | benign | -0.571 | Destabilizing | 0.001 | N | 0.378 | neutral | N | 0.487003889 | None | None | N |
E/C | 0.7437 | likely_pathogenic | 0.7456 | pathogenic | -0.401 | Destabilizing | 0.909 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/D | 0.1312 | likely_benign | 0.1082 | benign | -0.833 | Destabilizing | None | N | 0.201 | neutral | N | 0.505552364 | None | None | N |
E/F | 0.6721 | likely_pathogenic | 0.6493 | pathogenic | 0.23 | Stabilizing | 0.726 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/G | 0.1899 | likely_benign | 0.1917 | benign | -0.939 | Destabilizing | 0.124 | N | 0.555 | neutral | N | 0.507360518 | None | None | N |
E/H | 0.2968 | likely_benign | 0.2981 | benign | 0.206 | Stabilizing | 0.567 | D | 0.598 | neutral | None | None | None | None | N |
E/I | 0.3881 | ambiguous | 0.38 | ambiguous | 0.431 | Stabilizing | 0.567 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/K | 0.1924 | likely_benign | 0.2168 | benign | -0.305 | Destabilizing | 0.124 | N | 0.505 | neutral | N | 0.469572921 | None | None | N |
E/L | 0.4352 | ambiguous | 0.4224 | ambiguous | 0.431 | Stabilizing | 0.396 | N | 0.61 | neutral | None | None | None | None | N |
E/M | 0.4681 | ambiguous | 0.4435 | ambiguous | 0.621 | Stabilizing | 0.909 | D | 0.661 | neutral | None | None | None | None | N |
E/N | 0.1886 | likely_benign | 0.1593 | benign | -0.944 | Destabilizing | 0.003 | N | 0.385 | neutral | None | None | None | None | N |
E/P | 0.8954 | likely_pathogenic | 0.8964 | pathogenic | 0.119 | Stabilizing | 0.567 | D | 0.626 | neutral | None | None | None | None | N |
E/Q | 0.1119 | likely_benign | 0.1169 | benign | -0.776 | Destabilizing | 0.497 | N | 0.566 | neutral | N | 0.455758262 | None | None | N |
E/R | 0.2655 | likely_benign | 0.2876 | benign | 0.101 | Stabilizing | 0.567 | D | 0.572 | neutral | None | None | None | None | N |
E/S | 0.1408 | likely_benign | 0.1309 | benign | -1.215 | Destabilizing | 0.157 | N | 0.495 | neutral | None | None | None | None | N |
E/T | 0.1764 | likely_benign | 0.1688 | benign | -0.899 | Destabilizing | 0.157 | N | 0.543 | neutral | None | None | None | None | N |
E/V | 0.2352 | likely_benign | 0.2276 | benign | 0.119 | Stabilizing | 0.331 | N | 0.582 | neutral | N | 0.476557608 | None | None | N |
E/W | 0.845 | likely_pathogenic | 0.8372 | pathogenic | 0.529 | Stabilizing | 0.968 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/Y | 0.5006 | ambiguous | 0.492 | ambiguous | 0.506 | Stabilizing | 0.726 | D | 0.669 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.