Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20046 | 60361;60362;60363 | chr2:178591683;178591682;178591681 | chr2:179456410;179456409;179456408 |
N2AB | 18405 | 55438;55439;55440 | chr2:178591683;178591682;178591681 | chr2:179456410;179456409;179456408 |
N2A | 17478 | 52657;52658;52659 | chr2:178591683;178591682;178591681 | chr2:179456410;179456409;179456408 |
N2B | 10981 | 33166;33167;33168 | chr2:178591683;178591682;178591681 | chr2:179456410;179456409;179456408 |
Novex-1 | 11106 | 33541;33542;33543 | chr2:178591683;178591682;178591681 | chr2:179456410;179456409;179456408 |
Novex-2 | 11173 | 33742;33743;33744 | chr2:178591683;178591682;178591681 | chr2:179456410;179456409;179456408 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | rs1290494704 | -1.038 | 0.999 | D | 0.759 | 0.774 | 0.889186418864 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/F | rs1290494704 | -1.038 | 0.999 | D | 0.759 | 0.774 | 0.889186418864 | gnomAD-4.0.0 | 1.5919E-06 | None | None | None | None | N | None | 0 | 2.28707E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9903 | likely_pathogenic | 0.9878 | pathogenic | -3.006 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
Y/C | 0.7932 | likely_pathogenic | 0.7632 | pathogenic | -1.687 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.656452204 | None | None | N |
Y/D | 0.9967 | likely_pathogenic | 0.9957 | pathogenic | -3.753 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | D | 0.67270373 | None | None | N |
Y/E | 0.9987 | likely_pathogenic | 0.9983 | pathogenic | -3.532 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
Y/F | 0.2083 | likely_benign | 0.1992 | benign | -1.167 | Destabilizing | 0.999 | D | 0.759 | deleterious | D | 0.609596023 | None | None | N |
Y/G | 0.9836 | likely_pathogenic | 0.9827 | pathogenic | -3.417 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
Y/H | 0.9424 | likely_pathogenic | 0.9345 | pathogenic | -2.364 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.67270373 | None | None | N |
Y/I | 0.9553 | likely_pathogenic | 0.9291 | pathogenic | -1.621 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Y/K | 0.9974 | likely_pathogenic | 0.9969 | pathogenic | -2.365 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
Y/L | 0.8843 | likely_pathogenic | 0.8558 | pathogenic | -1.621 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
Y/M | 0.9641 | likely_pathogenic | 0.9534 | pathogenic | -1.392 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
Y/N | 0.9693 | likely_pathogenic | 0.959 | pathogenic | -3.26 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.672501926 | None | None | N |
Y/P | 0.9984 | likely_pathogenic | 0.9983 | pathogenic | -2.101 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
Y/Q | 0.9954 | likely_pathogenic | 0.9941 | pathogenic | -2.944 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
Y/R | 0.9872 | likely_pathogenic | 0.9859 | pathogenic | -2.288 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/S | 0.9715 | likely_pathogenic | 0.9631 | pathogenic | -3.478 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | D | 0.67270373 | None | None | N |
Y/T | 0.9906 | likely_pathogenic | 0.9863 | pathogenic | -3.133 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
Y/V | 0.9014 | likely_pathogenic | 0.8635 | pathogenic | -2.101 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/W | 0.668 | likely_pathogenic | 0.644 | pathogenic | -0.524 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.