Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20051 | 60376;60377;60378 | chr2:178591668;178591667;178591666 | chr2:179456395;179456394;179456393 |
N2AB | 18410 | 55453;55454;55455 | chr2:178591668;178591667;178591666 | chr2:179456395;179456394;179456393 |
N2A | 17483 | 52672;52673;52674 | chr2:178591668;178591667;178591666 | chr2:179456395;179456394;179456393 |
N2B | 10986 | 33181;33182;33183 | chr2:178591668;178591667;178591666 | chr2:179456395;179456394;179456393 |
Novex-1 | 11111 | 33556;33557;33558 | chr2:178591668;178591667;178591666 | chr2:179456395;179456394;179456393 |
Novex-2 | 11178 | 33757;33758;33759 | chr2:178591668;178591667;178591666 | chr2:179456395;179456394;179456393 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.001 | N | 0.285 | 0.057 | 0.188950314367 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6588 | likely_pathogenic | 0.6953 | pathogenic | -1.218 | Destabilizing | 0.575 | D | 0.647 | neutral | None | None | None | None | I |
K/C | 0.695 | likely_pathogenic | 0.6955 | pathogenic | -1.519 | Destabilizing | 0.991 | D | 0.798 | deleterious | None | None | None | None | I |
K/D | 0.9693 | likely_pathogenic | 0.9775 | pathogenic | -1.691 | Destabilizing | 0.826 | D | 0.667 | neutral | None | None | None | None | I |
K/E | 0.6153 | likely_pathogenic | 0.6608 | pathogenic | -1.456 | Destabilizing | 0.338 | N | 0.649 | neutral | N | 0.478610487 | None | None | I |
K/F | 0.8777 | likely_pathogenic | 0.9033 | pathogenic | -0.465 | Destabilizing | 0.906 | D | 0.807 | deleterious | None | None | None | None | I |
K/G | 0.8529 | likely_pathogenic | 0.8831 | pathogenic | -1.663 | Destabilizing | 0.575 | D | 0.659 | neutral | None | None | None | None | I |
K/H | 0.524 | ambiguous | 0.5861 | pathogenic | -1.918 | Destabilizing | 0.906 | D | 0.713 | prob.delet. | None | None | None | None | I |
K/I | 0.5775 | likely_pathogenic | 0.6199 | pathogenic | 0.014 | Stabilizing | 0.879 | D | 0.8 | deleterious | N | 0.46695669 | None | None | I |
K/L | 0.5783 | likely_pathogenic | 0.6271 | pathogenic | 0.014 | Stabilizing | 0.575 | D | 0.659 | neutral | None | None | None | None | I |
K/M | 0.298 | likely_benign | 0.3238 | benign | -0.356 | Destabilizing | 0.991 | D | 0.707 | prob.neutral | None | None | None | None | I |
K/N | 0.8826 | likely_pathogenic | 0.91 | pathogenic | -1.753 | Destabilizing | 0.505 | D | 0.625 | neutral | N | 0.475104994 | None | None | I |
K/P | 0.9961 | likely_pathogenic | 0.9974 | pathogenic | -0.372 | Destabilizing | 0.906 | D | 0.69 | prob.neutral | None | None | None | None | I |
K/Q | 0.2438 | likely_benign | 0.2742 | benign | -1.509 | Destabilizing | 0.505 | D | 0.633 | neutral | N | 0.502162555 | None | None | I |
K/R | 0.1003 | likely_benign | 0.1011 | benign | -1.423 | Destabilizing | 0.001 | N | 0.285 | neutral | N | 0.405233441 | None | None | I |
K/S | 0.7234 | likely_pathogenic | 0.7689 | pathogenic | -2.237 | Highly Destabilizing | 0.575 | D | 0.609 | neutral | None | None | None | None | I |
K/T | 0.4168 | ambiguous | 0.4744 | ambiguous | -1.774 | Destabilizing | 0.505 | D | 0.647 | neutral | N | 0.472189152 | None | None | I |
K/V | 0.5261 | ambiguous | 0.5475 | ambiguous | -0.372 | Destabilizing | 0.826 | D | 0.694 | prob.neutral | None | None | None | None | I |
K/W | 0.8718 | likely_pathogenic | 0.8982 | pathogenic | -0.559 | Destabilizing | 0.991 | D | 0.761 | deleterious | None | None | None | None | I |
K/Y | 0.781 | likely_pathogenic | 0.8083 | pathogenic | -0.206 | Destabilizing | 0.906 | D | 0.768 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.