Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20067 | 60424;60425;60426 | chr2:178591620;178591619;178591618 | chr2:179456347;179456346;179456345 |
N2AB | 18426 | 55501;55502;55503 | chr2:178591620;178591619;178591618 | chr2:179456347;179456346;179456345 |
N2A | 17499 | 52720;52721;52722 | chr2:178591620;178591619;178591618 | chr2:179456347;179456346;179456345 |
N2B | 11002 | 33229;33230;33231 | chr2:178591620;178591619;178591618 | chr2:179456347;179456346;179456345 |
Novex-1 | 11127 | 33604;33605;33606 | chr2:178591620;178591619;178591618 | chr2:179456347;179456346;179456345 |
Novex-2 | 11194 | 33805;33806;33807 | chr2:178591620;178591619;178591618 | chr2:179456347;179456346;179456345 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs373690962 | -2.826 | 0.546 | N | 0.798 | 0.398 | None | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 2.67E-05 | 0 |
I/T | rs373690962 | -2.826 | 0.546 | N | 0.798 | 0.398 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
I/T | rs373690962 | -2.826 | 0.546 | N | 0.798 | 0.398 | None | gnomAD-4.0.0 | 4.96079E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.46249E-05 | None | 0 | 0 | 5.08718E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7237 | likely_pathogenic | 0.7016 | pathogenic | -2.638 | Highly Destabilizing | 0.397 | N | 0.712 | prob.delet. | None | None | None | None | N |
I/C | 0.9439 | likely_pathogenic | 0.9461 | pathogenic | -1.722 | Destabilizing | 0.992 | D | 0.758 | deleterious | None | None | None | None | N |
I/D | 0.9937 | likely_pathogenic | 0.9937 | pathogenic | -3.247 | Highly Destabilizing | 0.972 | D | 0.851 | deleterious | None | None | None | None | N |
I/E | 0.9643 | likely_pathogenic | 0.9641 | pathogenic | -3.032 | Highly Destabilizing | 0.919 | D | 0.839 | deleterious | None | None | None | None | N |
I/F | 0.5465 | ambiguous | 0.5523 | ambiguous | -1.695 | Destabilizing | 0.737 | D | 0.752 | deleterious | None | None | None | None | N |
I/G | 0.975 | likely_pathogenic | 0.9734 | pathogenic | -3.152 | Highly Destabilizing | 0.919 | D | 0.816 | deleterious | None | None | None | None | N |
I/H | 0.9709 | likely_pathogenic | 0.9695 | pathogenic | -2.61 | Highly Destabilizing | 0.992 | D | 0.809 | deleterious | None | None | None | None | N |
I/K | 0.9298 | likely_pathogenic | 0.9203 | pathogenic | -2.185 | Highly Destabilizing | 0.895 | D | 0.83 | deleterious | N | 0.503312831 | None | None | N |
I/L | 0.2694 | likely_benign | 0.2507 | benign | -1.144 | Destabilizing | 0.002 | N | 0.239 | neutral | N | 0.492204638 | None | None | N |
I/M | 0.2233 | likely_benign | 0.2157 | benign | -0.879 | Destabilizing | 0.808 | D | 0.755 | deleterious | N | 0.479332773 | None | None | N |
I/N | 0.9509 | likely_pathogenic | 0.9502 | pathogenic | -2.508 | Highly Destabilizing | 0.972 | D | 0.829 | deleterious | None | None | None | None | N |
I/P | 0.9889 | likely_pathogenic | 0.9891 | pathogenic | -1.626 | Destabilizing | 0.972 | D | 0.839 | deleterious | None | None | None | None | N |
I/Q | 0.9379 | likely_pathogenic | 0.933 | pathogenic | -2.42 | Highly Destabilizing | 0.972 | D | 0.806 | deleterious | None | None | None | None | N |
I/R | 0.8957 | likely_pathogenic | 0.8828 | pathogenic | -1.802 | Destabilizing | 0.895 | D | 0.833 | deleterious | N | 0.486133629 | None | None | N |
I/S | 0.888 | likely_pathogenic | 0.8803 | pathogenic | -3.108 | Highly Destabilizing | 0.919 | D | 0.751 | deleterious | None | None | None | None | N |
I/T | 0.4988 | ambiguous | 0.4784 | ambiguous | -2.759 | Highly Destabilizing | 0.546 | D | 0.798 | deleterious | N | 0.502045384 | None | None | N |
I/V | 0.0708 | likely_benign | 0.0694 | benign | -1.626 | Destabilizing | 0.007 | N | 0.18 | neutral | N | 0.426462436 | None | None | N |
I/W | 0.976 | likely_pathogenic | 0.9757 | pathogenic | -2.139 | Highly Destabilizing | 0.992 | D | 0.796 | deleterious | None | None | None | None | N |
I/Y | 0.933 | likely_pathogenic | 0.9404 | pathogenic | -1.838 | Destabilizing | 0.919 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.