Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20082 | 60469;60470;60471 | chr2:178591481;178591480;178591479 | chr2:179456208;179456207;179456206 |
N2AB | 18441 | 55546;55547;55548 | chr2:178591481;178591480;178591479 | chr2:179456208;179456207;179456206 |
N2A | 17514 | 52765;52766;52767 | chr2:178591481;178591480;178591479 | chr2:179456208;179456207;179456206 |
N2B | 11017 | 33274;33275;33276 | chr2:178591481;178591480;178591479 | chr2:179456208;179456207;179456206 |
Novex-1 | 11142 | 33649;33650;33651 | chr2:178591481;178591480;178591479 | chr2:179456208;179456207;179456206 |
Novex-2 | 11209 | 33850;33851;33852 | chr2:178591481;178591480;178591479 | chr2:179456208;179456207;179456206 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.928 | D | 0.753 | 0.356 | 0.715013705373 | gnomAD-4.0.0 | 6.97569E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.06842E-07 | 0 | 0 |
V/G | None | None | 0.864 | N | 0.721 | 0.38 | 0.723455425128 | gnomAD-4.0.0 | 6.97572E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.23937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4993 | ambiguous | 0.4359 | ambiguous | -0.578 | Destabilizing | 0.024 | N | 0.343 | neutral | N | 0.482473221 | None | None | N |
V/C | 0.9229 | likely_pathogenic | 0.9123 | pathogenic | -0.644 | Destabilizing | 0.995 | D | 0.746 | deleterious | None | None | None | None | N |
V/D | 0.898 | likely_pathogenic | 0.8086 | pathogenic | -0.453 | Destabilizing | 0.945 | D | 0.795 | deleterious | None | None | None | None | N |
V/E | 0.8309 | likely_pathogenic | 0.7337 | pathogenic | -0.555 | Destabilizing | 0.928 | D | 0.753 | deleterious | D | 0.525378636 | None | None | N |
V/F | 0.536 | ambiguous | 0.467 | ambiguous | -0.711 | Destabilizing | 0.809 | D | 0.766 | deleterious | None | None | None | None | N |
V/G | 0.6089 | likely_pathogenic | 0.5379 | ambiguous | -0.733 | Destabilizing | 0.864 | D | 0.721 | prob.delet. | N | 0.501110785 | None | None | N |
V/H | 0.9431 | likely_pathogenic | 0.9004 | pathogenic | -0.26 | Destabilizing | 0.995 | D | 0.787 | deleterious | None | None | None | None | N |
V/I | 0.1162 | likely_benign | 0.1193 | benign | -0.31 | Destabilizing | 0.332 | N | 0.578 | neutral | None | None | None | None | N |
V/K | 0.8632 | likely_pathogenic | 0.7652 | pathogenic | -0.604 | Destabilizing | 0.945 | D | 0.749 | deleterious | None | None | None | None | N |
V/L | 0.5325 | ambiguous | 0.5087 | ambiguous | -0.31 | Destabilizing | 0.006 | N | 0.331 | neutral | N | 0.52018346 | None | None | N |
V/M | 0.416 | ambiguous | 0.3819 | ambiguous | -0.365 | Destabilizing | 0.864 | D | 0.673 | neutral | N | 0.501871254 | None | None | N |
V/N | 0.8417 | likely_pathogenic | 0.7326 | pathogenic | -0.34 | Destabilizing | 0.981 | D | 0.799 | deleterious | None | None | None | None | N |
V/P | 0.753 | likely_pathogenic | 0.6205 | pathogenic | -0.364 | Destabilizing | 0.945 | D | 0.774 | deleterious | None | None | None | None | N |
V/Q | 0.8211 | likely_pathogenic | 0.7269 | pathogenic | -0.577 | Destabilizing | 0.981 | D | 0.783 | deleterious | None | None | None | None | N |
V/R | 0.8405 | likely_pathogenic | 0.7392 | pathogenic | -0.049 | Destabilizing | 0.945 | D | 0.798 | deleterious | None | None | None | None | N |
V/S | 0.6729 | likely_pathogenic | 0.5775 | pathogenic | -0.701 | Destabilizing | 0.809 | D | 0.706 | prob.neutral | None | None | None | None | N |
V/T | 0.5714 | likely_pathogenic | 0.5016 | ambiguous | -0.703 | Destabilizing | 0.707 | D | 0.605 | neutral | None | None | None | None | N |
V/W | 0.9623 | likely_pathogenic | 0.9473 | pathogenic | -0.806 | Destabilizing | 0.995 | D | 0.755 | deleterious | None | None | None | None | N |
V/Y | 0.8951 | likely_pathogenic | 0.8458 | pathogenic | -0.517 | Destabilizing | 0.945 | D | 0.776 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.