Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20090 | 60493;60494;60495 | chr2:178591457;178591456;178591455 | chr2:179456184;179456183;179456182 |
N2AB | 18449 | 55570;55571;55572 | chr2:178591457;178591456;178591455 | chr2:179456184;179456183;179456182 |
N2A | 17522 | 52789;52790;52791 | chr2:178591457;178591456;178591455 | chr2:179456184;179456183;179456182 |
N2B | 11025 | 33298;33299;33300 | chr2:178591457;178591456;178591455 | chr2:179456184;179456183;179456182 |
Novex-1 | 11150 | 33673;33674;33675 | chr2:178591457;178591456;178591455 | chr2:179456184;179456183;179456182 |
Novex-2 | 11217 | 33874;33875;33876 | chr2:178591457;178591456;178591455 | chr2:179456184;179456183;179456182 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 1.0 | D | 0.671 | 0.764 | 0.893265043611 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6279 | likely_pathogenic | 0.5307 | ambiguous | -1.785 | Destabilizing | 0.999 | D | 0.469 | neutral | N | 0.516554083 | None | None | N |
V/C | 0.905 | likely_pathogenic | 0.8787 | pathogenic | -1.282 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
V/D | 0.9889 | likely_pathogenic | 0.9846 | pathogenic | -1.824 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
V/E | 0.947 | likely_pathogenic | 0.9275 | pathogenic | -1.735 | Destabilizing | 1.0 | D | 0.671 | neutral | D | 0.5559188 | None | None | N |
V/F | 0.6546 | likely_pathogenic | 0.5795 | pathogenic | -1.185 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/G | 0.8034 | likely_pathogenic | 0.7783 | pathogenic | -2.205 | Highly Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.516329702 | None | None | N |
V/H | 0.9845 | likely_pathogenic | 0.9741 | pathogenic | -1.821 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
V/I | 0.1294 | likely_benign | 0.1133 | benign | -0.685 | Destabilizing | 0.997 | D | 0.476 | neutral | D | 0.524885565 | None | None | N |
V/K | 0.9518 | likely_pathogenic | 0.9278 | pathogenic | -1.6 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
V/L | 0.5774 | likely_pathogenic | 0.4902 | ambiguous | -0.685 | Destabilizing | 0.997 | D | 0.493 | neutral | N | 0.510743387 | None | None | N |
V/M | 0.5127 | ambiguous | 0.4196 | ambiguous | -0.561 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
V/N | 0.9686 | likely_pathogenic | 0.955 | pathogenic | -1.561 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/P | 0.9939 | likely_pathogenic | 0.9909 | pathogenic | -1.019 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
V/Q | 0.9187 | likely_pathogenic | 0.8926 | pathogenic | -1.598 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
V/R | 0.935 | likely_pathogenic | 0.9153 | pathogenic | -1.186 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
V/S | 0.8609 | likely_pathogenic | 0.8131 | pathogenic | -2.154 | Highly Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/T | 0.6997 | likely_pathogenic | 0.6107 | pathogenic | -1.943 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
V/W | 0.9927 | likely_pathogenic | 0.989 | pathogenic | -1.526 | Destabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | N |
V/Y | 0.9587 | likely_pathogenic | 0.9393 | pathogenic | -1.196 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.