Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20091 | 60496;60497;60498 | chr2:178591454;178591453;178591452 | chr2:179456181;179456180;179456179 |
N2AB | 18450 | 55573;55574;55575 | chr2:178591454;178591453;178591452 | chr2:179456181;179456180;179456179 |
N2A | 17523 | 52792;52793;52794 | chr2:178591454;178591453;178591452 | chr2:179456181;179456180;179456179 |
N2B | 11026 | 33301;33302;33303 | chr2:178591454;178591453;178591452 | chr2:179456181;179456180;179456179 |
Novex-1 | 11151 | 33676;33677;33678 | chr2:178591454;178591453;178591452 | chr2:179456181;179456180;179456179 |
Novex-2 | 11218 | 33877;33878;33879 | chr2:178591454;178591453;178591452 | chr2:179456181;179456180;179456179 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs775961664 | 0.123 | 1.0 | D | 0.722 | 0.384 | 0.31077124679 | gnomAD-2.1.1 | 4.29E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.78E-05 | None | 0 | 0 | 0 |
K/N | rs775961664 | 0.123 | 1.0 | D | 0.722 | 0.384 | 0.31077124679 | gnomAD-4.0.0 | 1.38387E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.41371E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8446 | likely_pathogenic | 0.8369 | pathogenic | -0.007 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/C | 0.9417 | likely_pathogenic | 0.9302 | pathogenic | -0.392 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/D | 0.9518 | likely_pathogenic | 0.9551 | pathogenic | 0.006 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
K/E | 0.6619 | likely_pathogenic | 0.6754 | pathogenic | 0.024 | Stabilizing | 0.999 | D | 0.725 | prob.delet. | D | 0.523938629 | None | None | N |
K/F | 0.9716 | likely_pathogenic | 0.9694 | pathogenic | -0.189 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/G | 0.9197 | likely_pathogenic | 0.9196 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
K/H | 0.5951 | likely_pathogenic | 0.5876 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
K/I | 0.849 | likely_pathogenic | 0.8379 | pathogenic | 0.441 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/L | 0.7568 | likely_pathogenic | 0.7442 | pathogenic | 0.441 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
K/M | 0.6369 | likely_pathogenic | 0.6387 | pathogenic | 0.083 | Stabilizing | 1.0 | D | 0.643 | neutral | D | 0.53583049 | None | None | N |
K/N | 0.886 | likely_pathogenic | 0.8925 | pathogenic | 0.006 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | D | 0.525805498 | None | None | N |
K/P | 0.8533 | likely_pathogenic | 0.8457 | pathogenic | 0.319 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/Q | 0.3508 | ambiguous | 0.3445 | ambiguous | -0.112 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | D | 0.5262855 | None | None | N |
K/R | 0.1004 | likely_benign | 0.0948 | benign | -0.108 | Destabilizing | 0.999 | D | 0.656 | neutral | N | 0.445824562 | None | None | N |
K/S | 0.8978 | likely_pathogenic | 0.8972 | pathogenic | -0.45 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
K/T | 0.6451 | likely_pathogenic | 0.6512 | pathogenic | -0.282 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.511086762 | None | None | N |
K/V | 0.7964 | likely_pathogenic | 0.7841 | pathogenic | 0.319 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/W | 0.949 | likely_pathogenic | 0.9456 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
K/Y | 0.9146 | likely_pathogenic | 0.9147 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.