Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20110 | 60553;60554;60555 | chr2:178591397;178591396;178591395 | chr2:179456124;179456123;179456122 |
N2AB | 18469 | 55630;55631;55632 | chr2:178591397;178591396;178591395 | chr2:179456124;179456123;179456122 |
N2A | 17542 | 52849;52850;52851 | chr2:178591397;178591396;178591395 | chr2:179456124;179456123;179456122 |
N2B | 11045 | 33358;33359;33360 | chr2:178591397;178591396;178591395 | chr2:179456124;179456123;179456122 |
Novex-1 | 11170 | 33733;33734;33735 | chr2:178591397;178591396;178591395 | chr2:179456124;179456123;179456122 |
Novex-2 | 11237 | 33934;33935;33936 | chr2:178591397;178591396;178591395 | chr2:179456124;179456123;179456122 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.787 | N | 0.669 | 0.189 | 0.336155897331 | gnomAD-4.0.0 | 4.78042E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58512E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4541 | ambiguous | 0.4397 | ambiguous | -0.786 | Destabilizing | 0.985 | D | 0.699 | prob.neutral | None | None | None | None | I |
A/D | 0.8663 | likely_pathogenic | 0.8941 | pathogenic | -0.654 | Destabilizing | 0.945 | D | 0.832 | deleterious | None | None | None | None | I |
A/E | 0.7385 | likely_pathogenic | 0.7805 | pathogenic | -0.711 | Destabilizing | 0.928 | D | 0.746 | deleterious | N | 0.500367225 | None | None | I |
A/F | 0.5655 | likely_pathogenic | 0.6008 | pathogenic | -0.928 | Destabilizing | 0.894 | D | 0.838 | deleterious | None | None | None | None | I |
A/G | 0.2505 | likely_benign | 0.2638 | benign | -0.946 | Destabilizing | 0.787 | D | 0.669 | neutral | N | 0.488846335 | None | None | I |
A/H | 0.8315 | likely_pathogenic | 0.8555 | pathogenic | -1.128 | Destabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | I |
A/I | 0.2042 | likely_benign | 0.1951 | benign | -0.265 | Destabilizing | 0.593 | D | 0.752 | deleterious | None | None | None | None | I |
A/K | 0.8236 | likely_pathogenic | 0.861 | pathogenic | -0.962 | Destabilizing | 0.945 | D | 0.739 | prob.delet. | None | None | None | None | I |
A/L | 0.2698 | likely_benign | 0.2954 | benign | -0.265 | Destabilizing | 0.547 | D | 0.723 | prob.delet. | None | None | None | None | I |
A/M | 0.3139 | likely_benign | 0.3114 | benign | -0.243 | Destabilizing | 0.97 | D | 0.721 | prob.delet. | None | None | None | None | I |
A/N | 0.6845 | likely_pathogenic | 0.7194 | pathogenic | -0.625 | Destabilizing | 0.981 | D | 0.831 | deleterious | None | None | None | None | I |
A/P | 0.3119 | likely_benign | 0.3249 | benign | -0.374 | Destabilizing | 0.013 | N | 0.526 | neutral | N | 0.488846335 | None | None | I |
A/Q | 0.7011 | likely_pathogenic | 0.7324 | pathogenic | -0.785 | Destabilizing | 0.981 | D | 0.725 | prob.delet. | None | None | None | None | I |
A/R | 0.7781 | likely_pathogenic | 0.8183 | pathogenic | -0.659 | Destabilizing | 0.945 | D | 0.732 | prob.delet. | None | None | None | None | I |
A/S | 0.1515 | likely_benign | 0.1515 | benign | -0.995 | Destabilizing | 0.645 | D | 0.673 | neutral | N | 0.494039796 | None | None | I |
A/T | 0.1042 | likely_benign | 0.1081 | benign | -0.95 | Destabilizing | 0.645 | D | 0.689 | prob.neutral | N | 0.481745289 | None | None | I |
A/V | 0.0925 | likely_benign | 0.0869 | benign | -0.374 | Destabilizing | 0.013 | N | 0.429 | neutral | N | 0.367155055 | None | None | I |
A/W | 0.9133 | likely_pathogenic | 0.923 | pathogenic | -1.228 | Destabilizing | 0.995 | D | 0.793 | deleterious | None | None | None | None | I |
A/Y | 0.7558 | likely_pathogenic | 0.7764 | pathogenic | -0.82 | Destabilizing | 0.945 | D | 0.84 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.