Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20116 | 60571;60572;60573 | chr2:178591379;178591378;178591377 | chr2:179456106;179456105;179456104 |
N2AB | 18475 | 55648;55649;55650 | chr2:178591379;178591378;178591377 | chr2:179456106;179456105;179456104 |
N2A | 17548 | 52867;52868;52869 | chr2:178591379;178591378;178591377 | chr2:179456106;179456105;179456104 |
N2B | 11051 | 33376;33377;33378 | chr2:178591379;178591378;178591377 | chr2:179456106;179456105;179456104 |
Novex-1 | 11176 | 33751;33752;33753 | chr2:178591379;178591378;178591377 | chr2:179456106;179456105;179456104 |
Novex-2 | 11243 | 33952;33953;33954 | chr2:178591379;178591378;178591377 | chr2:179456106;179456105;179456104 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 0.338 | N | 0.464 | 0.317 | 0.379881503574 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1614 | likely_benign | 0.1742 | benign | -0.194 | Destabilizing | 0.174 | N | 0.429 | neutral | N | 0.493939583 | None | None | N |
G/C | 0.2086 | likely_benign | 0.2471 | benign | -0.85 | Destabilizing | 0.991 | D | 0.611 | neutral | None | None | None | None | N |
G/D | 0.1433 | likely_benign | 0.1495 | benign | -0.481 | Destabilizing | 0.004 | N | 0.287 | neutral | None | None | None | None | N |
G/E | 0.1841 | likely_benign | 0.1953 | benign | -0.637 | Destabilizing | 0.338 | N | 0.464 | neutral | N | 0.485328302 | None | None | N |
G/F | 0.5365 | ambiguous | 0.5666 | pathogenic | -1.001 | Destabilizing | 0.906 | D | 0.593 | neutral | None | None | None | None | N |
G/H | 0.2458 | likely_benign | 0.2837 | benign | -0.333 | Destabilizing | 0.973 | D | 0.509 | neutral | None | None | None | None | N |
G/I | 0.3023 | likely_benign | 0.3244 | benign | -0.474 | Destabilizing | 0.906 | D | 0.589 | neutral | None | None | None | None | N |
G/K | 0.2607 | likely_benign | 0.2843 | benign | -0.455 | Destabilizing | 0.404 | N | 0.469 | neutral | None | None | None | None | N |
G/L | 0.4519 | ambiguous | 0.4763 | ambiguous | -0.474 | Destabilizing | 0.826 | D | 0.567 | neutral | None | None | None | None | N |
G/M | 0.4326 | ambiguous | 0.4553 | ambiguous | -0.517 | Destabilizing | 0.991 | D | 0.591 | neutral | None | None | None | None | N |
G/N | 0.1543 | likely_benign | 0.166 | benign | -0.207 | Destabilizing | 0.404 | N | 0.395 | neutral | None | None | None | None | N |
G/P | 0.8942 | likely_pathogenic | 0.9091 | pathogenic | -0.358 | Destabilizing | 0.906 | D | 0.503 | neutral | None | None | None | None | N |
G/Q | 0.2182 | likely_benign | 0.2408 | benign | -0.466 | Destabilizing | 0.826 | D | 0.501 | neutral | None | None | None | None | N |
G/R | 0.204 | likely_benign | 0.229 | benign | -0.1 | Destabilizing | 0.007 | N | 0.343 | neutral | N | 0.491217332 | None | None | N |
G/S | 0.0952 | likely_benign | 0.1007 | benign | -0.336 | Destabilizing | 0.018 | N | 0.222 | neutral | None | None | None | None | N |
G/T | 0.1558 | likely_benign | 0.1659 | benign | -0.429 | Destabilizing | 0.404 | N | 0.467 | neutral | None | None | None | None | N |
G/V | 0.2528 | likely_benign | 0.2756 | benign | -0.358 | Destabilizing | 0.782 | D | 0.596 | neutral | D | 0.524414102 | None | None | N |
G/W | 0.4101 | ambiguous | 0.4395 | ambiguous | -1.099 | Destabilizing | 0.988 | D | 0.595 | neutral | D | 0.535934991 | None | None | N |
G/Y | 0.3642 | ambiguous | 0.397 | ambiguous | -0.78 | Destabilizing | 0.906 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.