Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20133 | 60622;60623;60624 | chr2:178591328;178591327;178591326 | chr2:179456055;179456054;179456053 |
N2AB | 18492 | 55699;55700;55701 | chr2:178591328;178591327;178591326 | chr2:179456055;179456054;179456053 |
N2A | 17565 | 52918;52919;52920 | chr2:178591328;178591327;178591326 | chr2:179456055;179456054;179456053 |
N2B | 11068 | 33427;33428;33429 | chr2:178591328;178591327;178591326 | chr2:179456055;179456054;179456053 |
Novex-1 | 11193 | 33802;33803;33804 | chr2:178591328;178591327;178591326 | chr2:179456055;179456054;179456053 |
Novex-2 | 11260 | 34003;34004;34005 | chr2:178591328;178591327;178591326 | chr2:179456055;179456054;179456053 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs769272954 | -0.508 | 0.999 | N | 0.768 | 0.508 | None | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 1.29232E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/P | rs769272954 | -0.508 | 0.999 | N | 0.768 | 0.508 | None | gnomAD-4.0.0 | 1.59223E-06 | None | None | None | None | N | None | 5.66508E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1533 | likely_benign | 0.1657 | benign | -0.656 | Destabilizing | 0.973 | D | 0.502 | neutral | N | 0.483490737 | None | None | N |
S/C | 0.1697 | likely_benign | 0.1841 | benign | -0.471 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
S/D | 0.8512 | likely_pathogenic | 0.8665 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/E | 0.8249 | likely_pathogenic | 0.8596 | pathogenic | -0.336 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
S/F | 0.3794 | ambiguous | 0.4243 | ambiguous | -0.966 | Destabilizing | 0.998 | D | 0.754 | deleterious | None | None | None | None | N |
S/G | 0.2467 | likely_benign | 0.2631 | benign | -0.868 | Destabilizing | 0.996 | D | 0.552 | neutral | None | None | None | None | N |
S/H | 0.4966 | ambiguous | 0.5445 | ambiguous | -1.437 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
S/I | 0.3978 | ambiguous | 0.4564 | ambiguous | -0.207 | Destabilizing | 0.995 | D | 0.719 | prob.delet. | None | None | None | None | N |
S/K | 0.8867 | likely_pathogenic | 0.9201 | pathogenic | -0.693 | Destabilizing | 0.996 | D | 0.653 | neutral | None | None | None | None | N |
S/L | 0.1728 | likely_benign | 0.2027 | benign | -0.207 | Destabilizing | 0.978 | D | 0.627 | neutral | D | 0.529576522 | None | None | N |
S/M | 0.3538 | ambiguous | 0.4006 | ambiguous | 0.151 | Stabilizing | 0.96 | D | 0.545 | neutral | None | None | None | None | N |
S/N | 0.3762 | ambiguous | 0.4316 | ambiguous | -0.598 | Destabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | N |
S/P | 0.958 | likely_pathogenic | 0.9543 | pathogenic | -0.325 | Destabilizing | 0.999 | D | 0.768 | deleterious | N | 0.504521508 | None | None | N |
S/Q | 0.6613 | likely_pathogenic | 0.7145 | pathogenic | -0.825 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
S/R | 0.7847 | likely_pathogenic | 0.8287 | pathogenic | -0.557 | Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | N |
S/T | 0.1368 | likely_benign | 0.1532 | benign | -0.635 | Destabilizing | 0.994 | D | 0.536 | neutral | N | 0.508969176 | None | None | N |
S/V | 0.3643 | ambiguous | 0.42 | ambiguous | -0.325 | Destabilizing | 0.983 | D | 0.697 | prob.neutral | None | None | None | None | N |
S/W | 0.5947 | likely_pathogenic | 0.6122 | pathogenic | -0.934 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
S/Y | 0.3324 | likely_benign | 0.3589 | ambiguous | -0.669 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.