Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20139 | 60640;60641;60642 | chr2:178591310;178591309;178591308 | chr2:179456037;179456036;179456035 |
N2AB | 18498 | 55717;55718;55719 | chr2:178591310;178591309;178591308 | chr2:179456037;179456036;179456035 |
N2A | 17571 | 52936;52937;52938 | chr2:178591310;178591309;178591308 | chr2:179456037;179456036;179456035 |
N2B | 11074 | 33445;33446;33447 | chr2:178591310;178591309;178591308 | chr2:179456037;179456036;179456035 |
Novex-1 | 11199 | 33820;33821;33822 | chr2:178591310;178591309;178591308 | chr2:179456037;179456036;179456035 |
Novex-2 | 11266 | 34021;34022;34023 | chr2:178591310;178591309;178591308 | chr2:179456037;179456036;179456035 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1412813943 | -0.23 | 0.959 | N | 0.353 | 0.215 | 0.340032825777 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
K/R | rs1412813943 | -0.23 | 0.959 | N | 0.353 | 0.215 | 0.340032825777 | gnomAD-4.0.0 | 4.7771E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58124E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.396 | ambiguous | 0.4042 | ambiguous | -0.31 | Destabilizing | 0.17 | N | 0.166 | neutral | None | None | None | None | N |
K/C | 0.621 | likely_pathogenic | 0.6293 | pathogenic | -0.371 | Destabilizing | 0.999 | D | 0.479 | neutral | None | None | None | None | N |
K/D | 0.6054 | likely_pathogenic | 0.6055 | pathogenic | -0.723 | Destabilizing | 0.884 | D | 0.349 | neutral | None | None | None | None | N |
K/E | 0.204 | likely_benign | 0.2065 | benign | -0.638 | Destabilizing | 0.92 | D | 0.37 | neutral | N | 0.47941706 | None | None | N |
K/F | 0.8082 | likely_pathogenic | 0.8157 | pathogenic | -0.247 | Destabilizing | 0.997 | D | 0.494 | neutral | None | None | None | None | N |
K/G | 0.4596 | ambiguous | 0.4619 | ambiguous | -0.663 | Destabilizing | 0.759 | D | 0.377 | neutral | None | None | None | None | N |
K/H | 0.2645 | likely_benign | 0.2545 | benign | -1.237 | Destabilizing | 0.991 | D | 0.433 | neutral | None | None | None | None | N |
K/I | 0.4352 | ambiguous | 0.4714 | ambiguous | 0.594 | Stabilizing | 0.991 | D | 0.491 | neutral | None | None | None | None | N |
K/L | 0.425 | ambiguous | 0.4386 | ambiguous | 0.594 | Stabilizing | 0.939 | D | 0.412 | neutral | None | None | None | None | N |
K/M | 0.3137 | likely_benign | 0.3316 | benign | 0.695 | Stabilizing | 0.999 | D | 0.425 | neutral | D | 0.525229495 | None | None | N |
K/N | 0.4022 | ambiguous | 0.4065 | ambiguous | -0.505 | Destabilizing | 0.061 | N | 0.068 | neutral | N | 0.482169364 | None | None | N |
K/P | 0.7188 | likely_pathogenic | 0.7169 | pathogenic | 0.324 | Stabilizing | 0.991 | D | 0.414 | neutral | None | None | None | None | N |
K/Q | 0.123 | likely_benign | 0.1203 | benign | -0.645 | Destabilizing | 0.988 | D | 0.411 | neutral | N | 0.498290823 | None | None | N |
K/R | 0.0773 | likely_benign | 0.0765 | benign | -0.588 | Destabilizing | 0.959 | D | 0.353 | neutral | N | 0.459831222 | None | None | N |
K/S | 0.3864 | ambiguous | 0.399 | ambiguous | -0.977 | Destabilizing | 0.759 | D | 0.331 | neutral | None | None | None | None | N |
K/T | 0.1809 | likely_benign | 0.1994 | benign | -0.701 | Destabilizing | 0.92 | D | 0.355 | neutral | N | 0.479033058 | None | None | N |
K/V | 0.3986 | ambiguous | 0.4284 | ambiguous | 0.324 | Stabilizing | 0.939 | D | 0.441 | neutral | None | None | None | None | N |
K/W | 0.7293 | likely_pathogenic | 0.7249 | pathogenic | -0.242 | Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | N |
K/Y | 0.6528 | likely_pathogenic | 0.6579 | pathogenic | 0.14 | Stabilizing | 0.997 | D | 0.482 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.