Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20182 | 60769;60770;60771 | chr2:178591181;178591180;178591179 | chr2:179455908;179455907;179455906 |
N2AB | 18541 | 55846;55847;55848 | chr2:178591181;178591180;178591179 | chr2:179455908;179455907;179455906 |
N2A | 17614 | 53065;53066;53067 | chr2:178591181;178591180;178591179 | chr2:179455908;179455907;179455906 |
N2B | 11117 | 33574;33575;33576 | chr2:178591181;178591180;178591179 | chr2:179455908;179455907;179455906 |
Novex-1 | 11242 | 33949;33950;33951 | chr2:178591181;178591180;178591179 | chr2:179455908;179455907;179455906 |
Novex-2 | 11309 | 34150;34151;34152 | chr2:178591181;178591180;178591179 | chr2:179455908;179455907;179455906 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 1.0 | N | 0.663 | 0.274 | 0.552125808554 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1629 | likely_benign | 0.1588 | benign | -0.719 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | N |
L/C | 0.3981 | ambiguous | 0.4057 | ambiguous | -0.599 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/D | 0.4511 | ambiguous | 0.4668 | ambiguous | -0.186 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
L/E | 0.2109 | likely_benign | 0.206 | benign | -0.284 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/F | 0.1547 | likely_benign | 0.1551 | benign | -0.742 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/G | 0.4481 | ambiguous | 0.4209 | ambiguous | -0.889 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/H | 0.173 | likely_benign | 0.1826 | benign | -0.17 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
L/I | 0.0796 | likely_benign | 0.0846 | benign | -0.397 | Destabilizing | 0.999 | D | 0.445 | neutral | None | None | None | None | N |
L/K | 0.2348 | likely_benign | 0.229 | benign | -0.337 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
L/M | 0.096 | likely_benign | 0.0877 | benign | -0.331 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.474584789 | None | None | N |
L/N | 0.2718 | likely_benign | 0.2682 | benign | -0.115 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
L/P | 0.5781 | likely_pathogenic | 0.7017 | pathogenic | -0.471 | Destabilizing | 1.0 | D | 0.828 | deleterious | N | 0.471217427 | None | None | N |
L/Q | 0.1215 | likely_benign | 0.1178 | benign | -0.374 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.505050932 | None | None | N |
L/R | 0.1911 | likely_benign | 0.1997 | benign | 0.247 | Stabilizing | 1.0 | D | 0.825 | deleterious | N | 0.519441594 | None | None | N |
L/S | 0.1618 | likely_benign | 0.1621 | benign | -0.596 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/T | 0.1 | likely_benign | 0.1023 | benign | -0.585 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
L/V | 0.0759 | likely_benign | 0.0768 | benign | -0.471 | Destabilizing | 0.999 | D | 0.495 | neutral | N | 0.455507546 | None | None | N |
L/W | 0.2581 | likely_benign | 0.2843 | benign | -0.737 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
L/Y | 0.3552 | ambiguous | 0.3508 | ambiguous | -0.48 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.