Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20183 | 60772;60773;60774 | chr2:178591178;178591177;178591176 | chr2:179455905;179455904;179455903 |
N2AB | 18542 | 55849;55850;55851 | chr2:178591178;178591177;178591176 | chr2:179455905;179455904;179455903 |
N2A | 17615 | 53068;53069;53070 | chr2:178591178;178591177;178591176 | chr2:179455905;179455904;179455903 |
N2B | 11118 | 33577;33578;33579 | chr2:178591178;178591177;178591176 | chr2:179455905;179455904;179455903 |
Novex-1 | 11243 | 33952;33953;33954 | chr2:178591178;178591177;178591176 | chr2:179455905;179455904;179455903 |
Novex-2 | 11310 | 34153;34154;34155 | chr2:178591178;178591177;178591176 | chr2:179455905;179455904;179455903 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.117 | N | 0.379 | 0.244 | 0.218845423259 | gnomAD-4.0.0 | 1.5921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1788 | likely_benign | 0.1601 | benign | -0.534 | Destabilizing | 0.062 | N | 0.394 | neutral | N | 0.511880903 | None | None | N |
D/C | 0.6783 | likely_pathogenic | 0.6656 | pathogenic | -0.262 | Destabilizing | 0.935 | D | 0.516 | neutral | None | None | None | None | N |
D/E | 0.1176 | likely_benign | 0.0941 | benign | -0.636 | Destabilizing | None | N | 0.064 | neutral | N | 0.398518112 | None | None | N |
D/F | 0.7291 | likely_pathogenic | 0.7181 | pathogenic | -0.378 | Destabilizing | 0.791 | D | 0.465 | neutral | None | None | None | None | N |
D/G | 0.2345 | likely_benign | 0.2187 | benign | -0.816 | Destabilizing | 0.117 | N | 0.379 | neutral | N | 0.511227542 | None | None | N |
D/H | 0.3053 | likely_benign | 0.3069 | benign | -0.623 | Destabilizing | 0.484 | N | 0.399 | neutral | N | 0.482626639 | None | None | N |
D/I | 0.51 | ambiguous | 0.4865 | ambiguous | 0.186 | Stabilizing | 0.555 | D | 0.472 | neutral | None | None | None | None | N |
D/K | 0.4524 | ambiguous | 0.42 | ambiguous | -0.53 | Destabilizing | 0.081 | N | 0.365 | neutral | None | None | None | None | N |
D/L | 0.4359 | ambiguous | 0.4002 | ambiguous | 0.186 | Stabilizing | 0.38 | N | 0.421 | neutral | None | None | None | None | N |
D/M | 0.6333 | likely_pathogenic | 0.5925 | pathogenic | 0.513 | Stabilizing | 0.935 | D | 0.452 | neutral | None | None | None | None | N |
D/N | 0.1447 | likely_benign | 0.1382 | benign | -0.735 | Destabilizing | 0.117 | N | 0.387 | neutral | N | 0.483520866 | None | None | N |
D/P | 0.9256 | likely_pathogenic | 0.915 | pathogenic | -0.031 | Destabilizing | 0.555 | D | 0.389 | neutral | None | None | None | None | N |
D/Q | 0.3318 | likely_benign | 0.2979 | benign | -0.647 | Destabilizing | 0.081 | N | 0.329 | neutral | None | None | None | None | N |
D/R | 0.4801 | ambiguous | 0.4682 | ambiguous | -0.33 | Destabilizing | 0.235 | N | 0.405 | neutral | None | None | None | None | N |
D/S | 0.1444 | likely_benign | 0.1377 | benign | -0.932 | Destabilizing | 0.081 | N | 0.353 | neutral | None | None | None | None | N |
D/T | 0.2687 | likely_benign | 0.2559 | benign | -0.725 | Destabilizing | 0.149 | N | 0.403 | neutral | None | None | None | None | N |
D/V | 0.2894 | likely_benign | 0.2783 | benign | -0.031 | Destabilizing | 0.317 | N | 0.432 | neutral | N | 0.481359191 | None | None | N |
D/W | 0.8942 | likely_pathogenic | 0.8921 | pathogenic | -0.272 | Destabilizing | 0.935 | D | 0.581 | neutral | None | None | None | None | N |
D/Y | 0.339 | likely_benign | 0.3486 | ambiguous | -0.194 | Destabilizing | 0.741 | D | 0.466 | neutral | N | 0.48624749 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.