Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20197 | 60814;60815;60816 | chr2:178591136;178591135;178591134 | chr2:179455863;179455862;179455861 |
N2AB | 18556 | 55891;55892;55893 | chr2:178591136;178591135;178591134 | chr2:179455863;179455862;179455861 |
N2A | 17629 | 53110;53111;53112 | chr2:178591136;178591135;178591134 | chr2:179455863;179455862;179455861 |
N2B | 11132 | 33619;33620;33621 | chr2:178591136;178591135;178591134 | chr2:179455863;179455862;179455861 |
Novex-1 | 11257 | 33994;33995;33996 | chr2:178591136;178591135;178591134 | chr2:179455863;179455862;179455861 |
Novex-2 | 11324 | 34195;34196;34197 | chr2:178591136;178591135;178591134 | chr2:179455863;179455862;179455861 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.993 | N | 0.711 | 0.266 | 0.301455362545 | gnomAD-4.0.0 | 6.84413E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99653E-07 | 0 | 0 |
K/T | None | None | 0.993 | N | 0.657 | 0.281 | 0.400899426204 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.218 | likely_benign | 0.2413 | benign | 0.099 | Stabilizing | 0.983 | D | 0.637 | neutral | None | None | None | None | N |
K/C | 0.6949 | likely_pathogenic | 0.7037 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
K/D | 0.5266 | ambiguous | 0.5655 | pathogenic | -0.095 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/E | 0.1168 | likely_benign | 0.1334 | benign | -0.106 | Destabilizing | 0.977 | D | 0.655 | neutral | N | 0.494737937 | None | None | N |
K/F | 0.7633 | likely_pathogenic | 0.8005 | pathogenic | -0.189 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/G | 0.4126 | ambiguous | 0.4626 | ambiguous | -0.062 | Destabilizing | 0.998 | D | 0.589 | neutral | None | None | None | None | N |
K/H | 0.3779 | ambiguous | 0.3992 | ambiguous | -0.281 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/I | 0.2609 | likely_benign | 0.2851 | benign | 0.439 | Stabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/L | 0.2648 | likely_benign | 0.2927 | benign | 0.439 | Stabilizing | 0.995 | D | 0.589 | neutral | None | None | None | None | N |
K/M | 0.197 | likely_benign | 0.2134 | benign | 0.177 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | N | 0.475487069 | None | None | N |
K/N | 0.4358 | ambiguous | 0.4861 | ambiguous | 0.32 | Stabilizing | 0.993 | D | 0.711 | prob.delet. | N | 0.47537171 | None | None | N |
K/P | 0.6819 | likely_pathogenic | 0.7245 | pathogenic | 0.351 | Stabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/Q | 0.1274 | likely_benign | 0.1376 | benign | 0.141 | Stabilizing | 0.993 | D | 0.707 | prob.neutral | D | 0.522060612 | None | None | N |
K/R | 0.0865 | likely_benign | 0.0919 | benign | 0.047 | Stabilizing | 0.235 | N | 0.281 | neutral | N | 0.518134872 | None | None | N |
K/S | 0.3495 | ambiguous | 0.3904 | ambiguous | -0.086 | Destabilizing | 0.983 | D | 0.658 | neutral | None | None | None | None | N |
K/T | 0.1517 | likely_benign | 0.1662 | benign | 0.032 | Stabilizing | 0.993 | D | 0.657 | neutral | N | 0.52119382 | None | None | N |
K/V | 0.2054 | likely_benign | 0.2282 | benign | 0.351 | Stabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/W | 0.7911 | likely_pathogenic | 0.8157 | pathogenic | -0.258 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
K/Y | 0.6777 | likely_pathogenic | 0.7148 | pathogenic | 0.104 | Stabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.