Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20214 | 60865;60866;60867 | chr2:178591085;178591084;178591083 | chr2:179455812;179455811;179455810 |
N2AB | 18573 | 55942;55943;55944 | chr2:178591085;178591084;178591083 | chr2:179455812;179455811;179455810 |
N2A | 17646 | 53161;53162;53163 | chr2:178591085;178591084;178591083 | chr2:179455812;179455811;179455810 |
N2B | 11149 | 33670;33671;33672 | chr2:178591085;178591084;178591083 | chr2:179455812;179455811;179455810 |
Novex-1 | 11274 | 34045;34046;34047 | chr2:178591085;178591084;178591083 | chr2:179455812;179455811;179455810 |
Novex-2 | 11341 | 34246;34247;34248 | chr2:178591085;178591084;178591083 | chr2:179455812;179455811;179455810 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.379 | N | 0.395 | 0.246 | 0.243972157842 | gnomAD-4.0.0 | 1.59223E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
T/S | rs1358705514 | None | 0.007 | N | 0.143 | 0.098 | 0.144782658237 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/S | rs1358705514 | None | 0.007 | N | 0.143 | 0.098 | 0.144782658237 | gnomAD-4.0.0 | 5.12719E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.57703E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0842 | likely_benign | 0.0828 | benign | -0.769 | Destabilizing | 0.201 | N | 0.275 | neutral | N | 0.461068081 | None | None | N |
T/C | 0.3361 | likely_benign | 0.3249 | benign | -0.491 | Destabilizing | 0.992 | D | 0.463 | neutral | None | None | None | None | N |
T/D | 0.4565 | ambiguous | 0.4656 | ambiguous | -0.398 | Destabilizing | 0.617 | D | 0.38 | neutral | None | None | None | None | N |
T/E | 0.3263 | likely_benign | 0.3383 | benign | -0.387 | Destabilizing | 0.617 | D | 0.383 | neutral | None | None | None | None | N |
T/F | 0.3067 | likely_benign | 0.3034 | benign | -0.712 | Destabilizing | 0.92 | D | 0.565 | neutral | None | None | None | None | N |
T/G | 0.2106 | likely_benign | 0.2138 | benign | -1.046 | Destabilizing | 0.002 | N | 0.273 | neutral | None | None | None | None | N |
T/H | 0.2681 | likely_benign | 0.2729 | benign | -1.285 | Destabilizing | 0.977 | D | 0.553 | neutral | None | None | None | None | N |
T/I | 0.1409 | likely_benign | 0.1366 | benign | -0.116 | Destabilizing | 0.896 | D | 0.448 | neutral | N | 0.469111561 | None | None | N |
T/K | 0.1393 | likely_benign | 0.1428 | benign | -0.87 | Destabilizing | 0.379 | N | 0.395 | neutral | N | 0.454448753 | None | None | N |
T/L | 0.092 | likely_benign | 0.0927 | benign | -0.116 | Destabilizing | 0.617 | D | 0.397 | neutral | None | None | None | None | N |
T/M | 0.0955 | likely_benign | 0.099 | benign | 0.124 | Stabilizing | 0.992 | D | 0.456 | neutral | None | None | None | None | N |
T/N | 0.1442 | likely_benign | 0.1526 | benign | -0.817 | Destabilizing | 0.447 | N | 0.374 | neutral | None | None | None | None | N |
T/P | 0.1171 | likely_benign | 0.1208 | benign | -0.301 | Destabilizing | 0.896 | D | 0.437 | neutral | N | 0.476826967 | None | None | N |
T/Q | 0.2185 | likely_benign | 0.2251 | benign | -0.953 | Destabilizing | 0.85 | D | 0.469 | neutral | None | None | None | None | N |
T/R | 0.1271 | likely_benign | 0.138 | benign | -0.614 | Destabilizing | 0.81 | D | 0.446 | neutral | N | 0.517596154 | None | None | N |
T/S | 0.1114 | likely_benign | 0.1107 | benign | -1.063 | Destabilizing | 0.007 | N | 0.143 | neutral | N | 0.416797229 | None | None | N |
T/V | 0.1197 | likely_benign | 0.1129 | benign | -0.301 | Destabilizing | 0.617 | D | 0.372 | neutral | None | None | None | None | N |
T/W | 0.6567 | likely_pathogenic | 0.666 | pathogenic | -0.674 | Destabilizing | 0.992 | D | 0.593 | neutral | None | None | None | None | N |
T/Y | 0.3602 | ambiguous | 0.3596 | ambiguous | -0.458 | Destabilizing | 0.972 | D | 0.563 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.