Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20234 | 60925;60926;60927 | chr2:178591025;178591024;178591023 | chr2:179455752;179455751;179455750 |
N2AB | 18593 | 56002;56003;56004 | chr2:178591025;178591024;178591023 | chr2:179455752;179455751;179455750 |
N2A | 17666 | 53221;53222;53223 | chr2:178591025;178591024;178591023 | chr2:179455752;179455751;179455750 |
N2B | 11169 | 33730;33731;33732 | chr2:178591025;178591024;178591023 | chr2:179455752;179455751;179455750 |
Novex-1 | 11294 | 34105;34106;34107 | chr2:178591025;178591024;178591023 | chr2:179455752;179455751;179455750 |
Novex-2 | 11361 | 34306;34307;34308 | chr2:178591025;178591024;178591023 | chr2:179455752;179455751;179455750 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.689 | N | 0.266 | 0.253 | 0.219573609325 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1105 | likely_benign | 0.1155 | benign | -1.483 | Destabilizing | 0.835 | D | 0.551 | neutral | N | 0.478480406 | None | None | N |
P/C | 0.4902 | ambiguous | 0.4952 | ambiguous | -0.501 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
P/D | 0.5482 | ambiguous | 0.5785 | pathogenic | -1.795 | Destabilizing | 0.991 | D | 0.623 | neutral | None | None | None | None | N |
P/E | 0.4017 | ambiguous | 0.4291 | ambiguous | -1.808 | Destabilizing | 0.991 | D | 0.607 | neutral | None | None | None | None | N |
P/F | 0.5495 | ambiguous | 0.5772 | pathogenic | -1.282 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
P/G | 0.3151 | likely_benign | 0.3418 | ambiguous | -1.75 | Destabilizing | 0.97 | D | 0.63 | neutral | None | None | None | None | N |
P/H | 0.2455 | likely_benign | 0.2605 | benign | -1.525 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
P/I | 0.3299 | likely_benign | 0.3431 | ambiguous | -0.831 | Destabilizing | 0.991 | D | 0.773 | deleterious | None | None | None | None | N |
P/K | 0.4031 | ambiguous | 0.4242 | ambiguous | -1.344 | Destabilizing | 0.991 | D | 0.628 | neutral | None | None | None | None | N |
P/L | 0.1502 | likely_benign | 0.1602 | benign | -0.831 | Destabilizing | 0.961 | D | 0.677 | prob.neutral | N | 0.489948193 | None | None | N |
P/M | 0.347 | ambiguous | 0.359 | ambiguous | -0.434 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
P/N | 0.3539 | ambiguous | 0.3737 | ambiguous | -0.956 | Destabilizing | 0.991 | D | 0.681 | prob.neutral | None | None | None | None | N |
P/Q | 0.2217 | likely_benign | 0.2336 | benign | -1.156 | Destabilizing | 0.994 | D | 0.699 | prob.neutral | N | 0.4618948 | None | None | N |
P/R | 0.28 | likely_benign | 0.2936 | benign | -0.795 | Destabilizing | 0.994 | D | 0.745 | deleterious | N | 0.454083394 | None | None | N |
P/S | 0.1313 | likely_benign | 0.1433 | benign | -1.255 | Destabilizing | 0.689 | D | 0.266 | neutral | N | 0.387415684 | None | None | N |
P/T | 0.1051 | likely_benign | 0.109 | benign | -1.19 | Destabilizing | 0.248 | N | 0.266 | neutral | N | 0.382065793 | None | None | N |
P/V | 0.2308 | likely_benign | 0.2379 | benign | -1.019 | Destabilizing | 0.97 | D | 0.642 | neutral | None | None | None | None | N |
P/W | 0.6588 | likely_pathogenic | 0.6843 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
P/Y | 0.4803 | ambiguous | 0.498 | ambiguous | -1.28 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.