Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20260 | 61003;61004;61005 | chr2:178590947;178590946;178590945 | chr2:179455674;179455673;179455672 |
N2AB | 18619 | 56080;56081;56082 | chr2:178590947;178590946;178590945 | chr2:179455674;179455673;179455672 |
N2A | 17692 | 53299;53300;53301 | chr2:178590947;178590946;178590945 | chr2:179455674;179455673;179455672 |
N2B | 11195 | 33808;33809;33810 | chr2:178590947;178590946;178590945 | chr2:179455674;179455673;179455672 |
Novex-1 | 11320 | 34183;34184;34185 | chr2:178590947;178590946;178590945 | chr2:179455674;179455673;179455672 |
Novex-2 | 11387 | 34384;34385;34386 | chr2:178590947;178590946;178590945 | chr2:179455674;179455673;179455672 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.999 | D | 0.9 | 0.385 | 0.761728025676 | gnomAD-4.0.0 | 1.59225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8603E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3321 | likely_benign | 0.4084 | ambiguous | -0.598 | Destabilizing | 0.994 | D | 0.522 | neutral | D | 0.524375772 | None | None | N |
S/C | 0.3047 | likely_benign | 0.3718 | ambiguous | -0.28 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.528948277 | None | None | N |
S/D | 0.9571 | likely_pathogenic | 0.9659 | pathogenic | 0.071 | Stabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
S/E | 0.9868 | likely_pathogenic | 0.9911 | pathogenic | 0.167 | Stabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
S/F | 0.9179 | likely_pathogenic | 0.9595 | pathogenic | -0.613 | Destabilizing | 0.999 | D | 0.9 | deleterious | D | 0.528694787 | None | None | N |
S/G | 0.3709 | ambiguous | 0.4573 | ambiguous | -0.933 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/H | 0.9362 | likely_pathogenic | 0.9526 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
S/I | 0.8556 | likely_pathogenic | 0.914 | pathogenic | 0.211 | Stabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
S/K | 0.9964 | likely_pathogenic | 0.9975 | pathogenic | -0.121 | Destabilizing | 0.998 | D | 0.786 | deleterious | None | None | None | None | N |
S/L | 0.6664 | likely_pathogenic | 0.7818 | pathogenic | 0.211 | Stabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
S/M | 0.7797 | likely_pathogenic | 0.829 | pathogenic | 0.183 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
S/N | 0.8549 | likely_pathogenic | 0.8926 | pathogenic | -0.399 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
S/P | 0.9778 | likely_pathogenic | 0.9919 | pathogenic | -0.022 | Destabilizing | 0.999 | D | 0.85 | deleterious | D | 0.525415922 | None | None | N |
S/Q | 0.9792 | likely_pathogenic | 0.9832 | pathogenic | -0.304 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
S/R | 0.9929 | likely_pathogenic | 0.9958 | pathogenic | -0.325 | Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
S/T | 0.2588 | likely_benign | 0.2897 | benign | -0.33 | Destabilizing | 0.997 | D | 0.704 | prob.delet. | N | 0.469330566 | None | None | N |
S/V | 0.7819 | likely_pathogenic | 0.8534 | pathogenic | -0.022 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
S/W | 0.9499 | likely_pathogenic | 0.9751 | pathogenic | -0.686 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
S/Y | 0.9114 | likely_pathogenic | 0.9545 | pathogenic | -0.308 | Destabilizing | 0.999 | D | 0.913 | deleterious | D | 0.528441298 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.