Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20263 | 61012;61013;61014 | chr2:178590938;178590937;178590936 | chr2:179455665;179455664;179455663 |
N2AB | 18622 | 56089;56090;56091 | chr2:178590938;178590937;178590936 | chr2:179455665;179455664;179455663 |
N2A | 17695 | 53308;53309;53310 | chr2:178590938;178590937;178590936 | chr2:179455665;179455664;179455663 |
N2B | 11198 | 33817;33818;33819 | chr2:178590938;178590937;178590936 | chr2:179455665;179455664;179455663 |
Novex-1 | 11323 | 34192;34193;34194 | chr2:178590938;178590937;178590936 | chr2:179455665;179455664;179455663 |
Novex-2 | 11390 | 34393;34394;34395 | chr2:178590938;178590937;178590936 | chr2:179455665;179455664;179455663 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs886038850 | -0.441 | 0.058 | N | 0.314 | 0.167 | 0.112648838833 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
T/A | rs886038850 | -0.441 | 0.058 | N | 0.314 | 0.167 | 0.112648838833 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93874E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs886038850 | -0.441 | 0.058 | N | 0.314 | 0.167 | 0.112648838833 | gnomAD-4.0.0 | 1.85968E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.46229E-05 | None | 0 | 0 | 8.47836E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0841 | likely_benign | 0.0862 | benign | -0.819 | Destabilizing | 0.058 | N | 0.314 | neutral | N | 0.511819401 | None | None | N |
T/C | 0.3308 | likely_benign | 0.3189 | benign | -0.564 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
T/D | 0.6946 | likely_pathogenic | 0.7197 | pathogenic | -0.384 | Destabilizing | 0.995 | D | 0.725 | deleterious | None | None | None | None | N |
T/E | 0.3833 | ambiguous | 0.3951 | ambiguous | -0.274 | Destabilizing | 0.989 | D | 0.674 | prob.neutral | None | None | None | None | N |
T/F | 0.3206 | likely_benign | 0.3145 | benign | -0.677 | Destabilizing | 0.995 | D | 0.855 | deleterious | None | None | None | None | N |
T/G | 0.4629 | ambiguous | 0.4697 | ambiguous | -1.173 | Destabilizing | 0.929 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/H | 0.3884 | ambiguous | 0.3884 | ambiguous | -1.271 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
T/I | 0.1307 | likely_benign | 0.131 | benign | 0.063 | Stabilizing | 0.986 | D | 0.743 | deleterious | N | 0.375214391 | None | None | N |
T/K | 0.3203 | likely_benign | 0.3072 | benign | -0.543 | Destabilizing | 0.989 | D | 0.649 | prob.neutral | None | None | None | None | N |
T/L | 0.1225 | likely_benign | 0.122 | benign | 0.063 | Stabilizing | 0.963 | D | 0.636 | neutral | None | None | None | None | N |
T/M | 0.0894 | likely_benign | 0.0902 | benign | 0.046 | Stabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
T/N | 0.336 | likely_benign | 0.3675 | ambiguous | -0.886 | Destabilizing | 0.993 | D | 0.648 | neutral | N | 0.513206268 | None | None | N |
T/P | 0.7108 | likely_pathogenic | 0.7249 | pathogenic | -0.197 | Destabilizing | 0.993 | D | 0.754 | deleterious | N | 0.494351148 | None | None | N |
T/Q | 0.2868 | likely_benign | 0.2847 | benign | -0.784 | Destabilizing | 0.995 | D | 0.743 | deleterious | None | None | None | None | N |
T/R | 0.2527 | likely_benign | 0.2454 | benign | -0.533 | Destabilizing | 0.995 | D | 0.751 | deleterious | None | None | None | None | N |
T/S | 0.1898 | likely_benign | 0.1983 | benign | -1.18 | Destabilizing | 0.908 | D | 0.505 | neutral | N | 0.492270848 | None | None | N |
T/V | 0.0895 | likely_benign | 0.0868 | benign | -0.197 | Destabilizing | 0.929 | D | 0.504 | neutral | None | None | None | None | N |
T/W | 0.7274 | likely_pathogenic | 0.7151 | pathogenic | -0.736 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
T/Y | 0.3869 | ambiguous | 0.3856 | ambiguous | -0.413 | Destabilizing | 0.998 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.