Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20282 | 61069;61070;61071 | chr2:178590881;178590880;178590879 | chr2:179455608;179455607;179455606 |
N2AB | 18641 | 56146;56147;56148 | chr2:178590881;178590880;178590879 | chr2:179455608;179455607;179455606 |
N2A | 17714 | 53365;53366;53367 | chr2:178590881;178590880;178590879 | chr2:179455608;179455607;179455606 |
N2B | 11217 | 33874;33875;33876 | chr2:178590881;178590880;178590879 | chr2:179455608;179455607;179455606 |
Novex-1 | 11342 | 34249;34250;34251 | chr2:178590881;178590880;178590879 | chr2:179455608;179455607;179455606 |
Novex-2 | 11409 | 34450;34451;34452 | chr2:178590881;178590880;178590879 | chr2:179455608;179455607;179455606 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 1.0 | N | 0.387 | 0.307 | 0.19670166235 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2976 | likely_benign | 0.334 | benign | -0.194 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.482520789 | None | None | N |
D/C | 0.7865 | likely_pathogenic | 0.8091 | pathogenic | 0.191 | Stabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | N |
D/E | 0.242 | likely_benign | 0.2728 | benign | -0.254 | Destabilizing | 1.0 | D | 0.387 | neutral | N | 0.48121128 | None | None | N |
D/F | 0.8187 | likely_pathogenic | 0.8536 | pathogenic | -0.256 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
D/G | 0.2953 | likely_benign | 0.3428 | ambiguous | -0.371 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | D | 0.524964844 | None | None | N |
D/H | 0.5518 | ambiguous | 0.6052 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.592 | neutral | N | 0.483614144 | None | None | N |
D/I | 0.7152 | likely_pathogenic | 0.7609 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
D/K | 0.7141 | likely_pathogenic | 0.7599 | pathogenic | 0.466 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
D/L | 0.6674 | likely_pathogenic | 0.7101 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
D/M | 0.7969 | likely_pathogenic | 0.8291 | pathogenic | 0.374 | Stabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
D/N | 0.1572 | likely_benign | 0.1754 | benign | 0.223 | Stabilizing | 1.0 | D | 0.631 | neutral | N | 0.4662819 | None | None | N |
D/P | 0.9774 | likely_pathogenic | 0.9797 | pathogenic | 0.1 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
D/Q | 0.5918 | likely_pathogenic | 0.6532 | pathogenic | 0.236 | Stabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
D/R | 0.735 | likely_pathogenic | 0.7791 | pathogenic | 0.545 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
D/S | 0.2143 | likely_benign | 0.2412 | benign | 0.123 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
D/T | 0.4742 | ambiguous | 0.5416 | ambiguous | 0.259 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/V | 0.4875 | ambiguous | 0.5405 | ambiguous | 0.1 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | N | 0.480536271 | None | None | N |
D/W | 0.9609 | likely_pathogenic | 0.9672 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
D/Y | 0.4688 | ambiguous | 0.5186 | ambiguous | -0.022 | Destabilizing | 1.0 | D | 0.604 | neutral | N | 0.493324608 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.