Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20296 | 61111;61112;61113 | chr2:178590839;178590838;178590837 | chr2:179455566;179455565;179455564 |
N2AB | 18655 | 56188;56189;56190 | chr2:178590839;178590838;178590837 | chr2:179455566;179455565;179455564 |
N2A | 17728 | 53407;53408;53409 | chr2:178590839;178590838;178590837 | chr2:179455566;179455565;179455564 |
N2B | 11231 | 33916;33917;33918 | chr2:178590839;178590838;178590837 | chr2:179455566;179455565;179455564 |
Novex-1 | 11356 | 34291;34292;34293 | chr2:178590839;178590838;178590837 | chr2:179455566;179455565;179455564 |
Novex-2 | 11423 | 34492;34493;34494 | chr2:178590839;178590838;178590837 | chr2:179455566;179455565;179455564 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs755102239 | 0.091 | 0.966 | N | 0.414 | 0.223 | 0.278968121808 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
K/Q | rs755102239 | 0.091 | 0.966 | N | 0.414 | 0.223 | 0.278968121808 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/Q | rs755102239 | 0.091 | 0.966 | N | 0.414 | 0.223 | 0.278968121808 | gnomAD-4.0.0 | 6.57575E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47085E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1608 | likely_benign | 0.1496 | benign | 0.037 | Stabilizing | 0.688 | D | 0.444 | neutral | None | None | None | None | I |
K/C | 0.5696 | likely_pathogenic | 0.5451 | ambiguous | -0.301 | Destabilizing | 0.998 | D | 0.4 | neutral | None | None | None | None | I |
K/D | 0.2799 | likely_benign | 0.2735 | benign | -0.158 | Destabilizing | 0.991 | D | 0.423 | neutral | None | None | None | None | I |
K/E | 0.0914 | likely_benign | 0.094 | benign | -0.173 | Destabilizing | 0.891 | D | 0.462 | neutral | N | 0.39318965 | None | None | I |
K/F | 0.5741 | likely_pathogenic | 0.5751 | pathogenic | -0.294 | Destabilizing | 0.949 | D | 0.459 | neutral | None | None | None | None | I |
K/G | 0.2795 | likely_benign | 0.2699 | benign | -0.103 | Destabilizing | 0.915 | D | 0.466 | neutral | None | None | None | None | I |
K/H | 0.2534 | likely_benign | 0.2482 | benign | -0.289 | Destabilizing | 0.998 | D | 0.409 | neutral | None | None | None | None | I |
K/I | 0.1919 | likely_benign | 0.1843 | benign | 0.32 | Stabilizing | 0.669 | D | 0.508 | neutral | N | 0.422360551 | None | None | I |
K/L | 0.1887 | likely_benign | 0.1858 | benign | 0.32 | Stabilizing | 0.007 | N | 0.237 | neutral | None | None | None | None | I |
K/M | 0.155 | likely_benign | 0.1516 | benign | 0.058 | Stabilizing | 0.325 | N | 0.327 | neutral | None | None | None | None | I |
K/N | 0.2387 | likely_benign | 0.2425 | benign | 0.153 | Stabilizing | 0.989 | D | 0.391 | neutral | N | 0.452470027 | None | None | I |
K/P | 0.3369 | likely_benign | 0.3131 | benign | 0.25 | Stabilizing | 0.991 | D | 0.435 | neutral | None | None | None | None | I |
K/Q | 0.1057 | likely_benign | 0.1036 | benign | -0.016 | Destabilizing | 0.966 | D | 0.414 | neutral | N | 0.450949875 | None | None | I |
K/R | 0.0828 | likely_benign | 0.0857 | benign | -0.049 | Destabilizing | 0.891 | D | 0.442 | neutral | N | 0.443791829 | None | None | I |
K/S | 0.2105 | likely_benign | 0.2027 | benign | -0.244 | Destabilizing | 0.915 | D | 0.431 | neutral | None | None | None | None | I |
K/T | 0.1015 | likely_benign | 0.0981 | benign | -0.136 | Destabilizing | 0.801 | D | 0.487 | neutral | N | 0.424224633 | None | None | I |
K/V | 0.1598 | likely_benign | 0.1479 | benign | 0.25 | Stabilizing | 0.525 | D | 0.421 | neutral | None | None | None | None | I |
K/W | 0.6806 | likely_pathogenic | 0.6792 | pathogenic | -0.372 | Destabilizing | 0.998 | D | 0.422 | neutral | None | None | None | None | I |
K/Y | 0.4713 | ambiguous | 0.4661 | ambiguous | -0.012 | Destabilizing | 0.974 | D | 0.457 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.