Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20308 | 61147;61148;61149 | chr2:178590803;178590802;178590801 | chr2:179455530;179455529;179455528 |
N2AB | 18667 | 56224;56225;56226 | chr2:178590803;178590802;178590801 | chr2:179455530;179455529;179455528 |
N2A | 17740 | 53443;53444;53445 | chr2:178590803;178590802;178590801 | chr2:179455530;179455529;179455528 |
N2B | 11243 | 33952;33953;33954 | chr2:178590803;178590802;178590801 | chr2:179455530;179455529;179455528 |
Novex-1 | 11368 | 34327;34328;34329 | chr2:178590803;178590802;178590801 | chr2:179455530;179455529;179455528 |
Novex-2 | 11435 | 34528;34529;34530 | chr2:178590803;178590802;178590801 | chr2:179455530;179455529;179455528 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | None | None | None | N | 0.417 | 0.179 | 0.784996480802 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.4917 | ambiguous | 0.5381 | ambiguous | -1.345 | Destabilizing | None | N | 0.412 | neutral | None | None | None | None | N |
M/C | 0.7286 | likely_pathogenic | 0.7048 | pathogenic | -2.823 | Highly Destabilizing | 0.003 | N | 0.572 | neutral | None | None | None | None | N |
M/D | 0.9925 | likely_pathogenic | 0.9944 | pathogenic | -2.17 | Highly Destabilizing | None | N | 0.579 | neutral | None | None | None | None | N |
M/E | 0.9472 | likely_pathogenic | 0.9583 | pathogenic | -1.907 | Destabilizing | None | N | 0.525 | neutral | None | None | None | None | N |
M/F | 0.5503 | ambiguous | 0.6607 | pathogenic | -0.125 | Destabilizing | None | N | 0.235 | neutral | None | None | None | None | N |
M/G | 0.8489 | likely_pathogenic | 0.8768 | pathogenic | -1.802 | Destabilizing | None | N | 0.537 | neutral | None | None | None | None | N |
M/H | 0.9685 | likely_pathogenic | 0.9773 | pathogenic | -1.83 | Destabilizing | 0.023 | N | 0.664 | neutral | None | None | None | None | N |
M/I | 0.1086 | likely_benign | 0.1307 | benign | -0.01 | Destabilizing | None | N | 0.189 | neutral | N | 0.287032472 | None | None | N |
M/K | 0.923 | likely_pathogenic | 0.9389 | pathogenic | -1.201 | Destabilizing | None | N | 0.47 | neutral | N | 0.483867583 | None | None | N |
M/L | 0.0708 | likely_benign | 0.0743 | benign | -0.01 | Destabilizing | None | N | 0.179 | neutral | N | 0.314896651 | None | None | N |
M/N | 0.9509 | likely_pathogenic | 0.9644 | pathogenic | -1.87 | Destabilizing | 0.004 | N | 0.574 | neutral | None | None | None | None | N |
M/P | 0.972 | likely_pathogenic | 0.9802 | pathogenic | -0.442 | Destabilizing | 0.001 | N | 0.559 | neutral | None | None | None | None | N |
M/Q | 0.8781 | likely_pathogenic | 0.8955 | pathogenic | -1.422 | Destabilizing | 0.004 | N | 0.329 | neutral | None | None | None | None | N |
M/R | 0.9105 | likely_pathogenic | 0.929 | pathogenic | -1.628 | Destabilizing | 0.001 | N | 0.513 | neutral | N | 0.483867583 | None | None | N |
M/S | 0.8236 | likely_pathogenic | 0.8651 | pathogenic | -2.133 | Highly Destabilizing | None | N | 0.431 | neutral | None | None | None | None | N |
M/T | 0.4235 | ambiguous | 0.4759 | ambiguous | -1.742 | Destabilizing | None | N | 0.417 | neutral | N | 0.483694224 | None | None | N |
M/V | 0.0498 | likely_benign | 0.05 | benign | -0.442 | Destabilizing | None | N | 0.189 | neutral | N | 0.259995013 | None | None | N |
M/W | 0.9533 | likely_pathogenic | 0.9725 | pathogenic | -0.558 | Destabilizing | 0.051 | N | 0.637 | neutral | None | None | None | None | N |
M/Y | 0.9368 | likely_pathogenic | 0.9602 | pathogenic | -0.453 | Destabilizing | None | N | 0.501 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.