Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20329 | 61210;61211;61212 | chr2:178590740;178590739;178590738 | chr2:179455467;179455466;179455465 |
N2AB | 18688 | 56287;56288;56289 | chr2:178590740;178590739;178590738 | chr2:179455467;179455466;179455465 |
N2A | 17761 | 53506;53507;53508 | chr2:178590740;178590739;178590738 | chr2:179455467;179455466;179455465 |
N2B | 11264 | 34015;34016;34017 | chr2:178590740;178590739;178590738 | chr2:179455467;179455466;179455465 |
Novex-1 | 11389 | 34390;34391;34392 | chr2:178590740;178590739;178590738 | chr2:179455467;179455466;179455465 |
Novex-2 | 11456 | 34591;34592;34593 | chr2:178590740;178590739;178590738 | chr2:179455467;179455466;179455465 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.722 | N | 0.577 | 0.175 | 0.199424873507 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4165 | ambiguous | 0.4218 | ambiguous | -0.263 | Destabilizing | 0.775 | D | 0.6 | neutral | None | None | None | None | N |
K/C | 0.4877 | ambiguous | 0.5349 | ambiguous | -0.445 | Destabilizing | 0.996 | D | 0.746 | deleterious | None | None | None | None | N |
K/D | 0.733 | likely_pathogenic | 0.7002 | pathogenic | 0.121 | Stabilizing | 0.961 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/E | 0.319 | likely_benign | 0.2844 | benign | 0.21 | Stabilizing | 0.722 | D | 0.575 | neutral | N | 0.391341424 | None | None | N |
K/F | 0.758 | likely_pathogenic | 0.7658 | pathogenic | -0.075 | Destabilizing | 0.987 | D | 0.738 | prob.delet. | None | None | None | None | N |
K/G | 0.5652 | likely_pathogenic | 0.5809 | pathogenic | -0.578 | Destabilizing | 0.775 | D | 0.615 | neutral | None | None | None | None | N |
K/H | 0.2041 | likely_benign | 0.2152 | benign | -0.783 | Destabilizing | 0.961 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/I | 0.3895 | ambiguous | 0.3666 | ambiguous | 0.527 | Stabilizing | 0.961 | D | 0.741 | deleterious | None | None | None | None | N |
K/L | 0.3854 | ambiguous | 0.3849 | ambiguous | 0.527 | Stabilizing | 0.775 | D | 0.615 | neutral | None | None | None | None | N |
K/M | 0.2546 | likely_benign | 0.2501 | benign | 0.154 | Stabilizing | 0.995 | D | 0.719 | prob.delet. | N | 0.458433208 | None | None | N |
K/N | 0.4755 | ambiguous | 0.443 | ambiguous | -0.208 | Destabilizing | 0.722 | D | 0.577 | neutral | N | 0.447157421 | None | None | N |
K/P | 0.9223 | likely_pathogenic | 0.9135 | pathogenic | 0.294 | Stabilizing | 0.987 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/Q | 0.1206 | likely_benign | 0.1208 | benign | -0.239 | Destabilizing | 0.722 | D | 0.603 | neutral | N | 0.426608791 | None | None | N |
K/R | 0.0695 | likely_benign | 0.073 | benign | -0.314 | Destabilizing | 0.003 | N | 0.237 | neutral | N | 0.372678305 | None | None | N |
K/S | 0.4233 | ambiguous | 0.4072 | ambiguous | -0.777 | Destabilizing | 0.775 | D | 0.525 | neutral | None | None | None | None | N |
K/T | 0.1499 | likely_benign | 0.1399 | benign | -0.495 | Destabilizing | 0.722 | D | 0.637 | neutral | N | 0.393629581 | None | None | N |
K/V | 0.3379 | likely_benign | 0.3289 | benign | 0.294 | Stabilizing | 0.961 | D | 0.655 | neutral | None | None | None | None | N |
K/W | 0.714 | likely_pathogenic | 0.7465 | pathogenic | -0.033 | Destabilizing | 0.996 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/Y | 0.5787 | likely_pathogenic | 0.5925 | pathogenic | 0.274 | Stabilizing | 0.987 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.