Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20341 | 61246;61247;61248 | chr2:178590704;178590703;178590702 | chr2:179455431;179455430;179455429 |
N2AB | 18700 | 56323;56324;56325 | chr2:178590704;178590703;178590702 | chr2:179455431;179455430;179455429 |
N2A | 17773 | 53542;53543;53544 | chr2:178590704;178590703;178590702 | chr2:179455431;179455430;179455429 |
N2B | 11276 | 34051;34052;34053 | chr2:178590704;178590703;178590702 | chr2:179455431;179455430;179455429 |
Novex-1 | 11401 | 34426;34427;34428 | chr2:178590704;178590703;178590702 | chr2:179455431;179455430;179455429 |
Novex-2 | 11468 | 34627;34628;34629 | chr2:178590704;178590703;178590702 | chr2:179455431;179455430;179455429 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs2050021727 | None | 1.0 | D | 0.839 | 0.882 | 0.923434868122 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs2050021727 | None | 1.0 | D | 0.839 | 0.882 | 0.923434868122 | gnomAD-4.0.0 | 6.57523E-06 | None | None | None | None | N | None | 0 | 6.5548E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/F | None | None | 0.999 | D | 0.751 | 0.834 | 0.807677208685 | gnomAD-4.0.0 | 3.18575E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72243E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9895 | likely_pathogenic | 0.9878 | pathogenic | -3.111 | Highly Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
Y/C | 0.8098 | likely_pathogenic | 0.8101 | pathogenic | -1.793 | Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.659702509 | None | None | N |
Y/D | 0.9935 | likely_pathogenic | 0.9892 | pathogenic | -3.219 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.685008456 | None | None | N |
Y/E | 0.9978 | likely_pathogenic | 0.9969 | pathogenic | -3.034 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/F | 0.2849 | likely_benign | 0.3152 | benign | -1.061 | Destabilizing | 0.999 | D | 0.751 | deleterious | D | 0.627704866 | None | None | N |
Y/G | 0.9847 | likely_pathogenic | 0.9804 | pathogenic | -3.515 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
Y/H | 0.9517 | likely_pathogenic | 0.9483 | pathogenic | -1.936 | Destabilizing | 1.0 | D | 0.822 | deleterious | D | 0.659702509 | None | None | N |
Y/I | 0.9547 | likely_pathogenic | 0.9554 | pathogenic | -1.782 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Y/K | 0.9981 | likely_pathogenic | 0.9973 | pathogenic | -2.178 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Y/L | 0.9273 | likely_pathogenic | 0.9271 | pathogenic | -1.782 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
Y/M | 0.9732 | likely_pathogenic | 0.9738 | pathogenic | -1.508 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
Y/N | 0.9643 | likely_pathogenic | 0.9545 | pathogenic | -2.869 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.668787291 | None | None | N |
Y/P | 0.9982 | likely_pathogenic | 0.9976 | pathogenic | -2.238 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Y/Q | 0.996 | likely_pathogenic | 0.9952 | pathogenic | -2.679 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Y/R | 0.991 | likely_pathogenic | 0.9886 | pathogenic | -1.812 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
Y/S | 0.9601 | likely_pathogenic | 0.9525 | pathogenic | -3.255 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.685008456 | None | None | N |
Y/T | 0.9858 | likely_pathogenic | 0.9839 | pathogenic | -2.96 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/V | 0.8819 | likely_pathogenic | 0.8838 | pathogenic | -2.238 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
Y/W | 0.6945 | likely_pathogenic | 0.7071 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.