Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20346 | 61261;61262;61263 | chr2:178590689;178590688;178590687 | chr2:179455416;179455415;179455414 |
N2AB | 18705 | 56338;56339;56340 | chr2:178590689;178590688;178590687 | chr2:179455416;179455415;179455414 |
N2A | 17778 | 53557;53558;53559 | chr2:178590689;178590688;178590687 | chr2:179455416;179455415;179455414 |
N2B | 11281 | 34066;34067;34068 | chr2:178590689;178590688;178590687 | chr2:179455416;179455415;179455414 |
Novex-1 | 11406 | 34441;34442;34443 | chr2:178590689;178590688;178590687 | chr2:179455416;179455415;179455414 |
Novex-2 | 11473 | 34642;34643;34644 | chr2:178590689;178590688;178590687 | chr2:179455416;179455415;179455414 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs2050017310 | None | 0.971 | N | 0.683 | 0.481 | 0.465549362696 | gnomAD-4.0.0 | 4.77807E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.33936E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6436 | likely_pathogenic | 0.7073 | pathogenic | -3.33 | Highly Destabilizing | 0.86 | D | 0.61 | neutral | None | None | None | None | N |
F/C | 0.3994 | ambiguous | 0.4806 | ambiguous | -1.871 | Destabilizing | 0.997 | D | 0.724 | prob.delet. | N | 0.474170664 | None | None | N |
F/D | 0.9509 | likely_pathogenic | 0.9618 | pathogenic | -3.332 | Highly Destabilizing | 0.993 | D | 0.767 | deleterious | None | None | None | None | N |
F/E | 0.9455 | likely_pathogenic | 0.96 | pathogenic | -3.18 | Highly Destabilizing | 0.978 | D | 0.768 | deleterious | None | None | None | None | N |
F/G | 0.9039 | likely_pathogenic | 0.9213 | pathogenic | -3.706 | Highly Destabilizing | 0.978 | D | 0.722 | prob.delet. | None | None | None | None | N |
F/H | 0.6826 | likely_pathogenic | 0.7349 | pathogenic | -1.96 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
F/I | 0.3132 | likely_benign | 0.4168 | ambiguous | -2.099 | Highly Destabilizing | 0.698 | D | 0.619 | neutral | N | 0.452024523 | None | None | N |
F/K | 0.9456 | likely_pathogenic | 0.9536 | pathogenic | -2.185 | Highly Destabilizing | 0.978 | D | 0.753 | deleterious | None | None | None | None | N |
F/L | 0.8758 | likely_pathogenic | 0.9235 | pathogenic | -2.099 | Highly Destabilizing | 0.014 | N | 0.437 | neutral | N | 0.487675892 | None | None | N |
F/M | 0.5078 | ambiguous | 0.6142 | pathogenic | -1.675 | Destabilizing | 0.956 | D | 0.713 | prob.delet. | None | None | None | None | N |
F/N | 0.8132 | likely_pathogenic | 0.8564 | pathogenic | -2.442 | Highly Destabilizing | 0.993 | D | 0.781 | deleterious | None | None | None | None | N |
F/P | 0.999 | likely_pathogenic | 0.9993 | pathogenic | -2.52 | Highly Destabilizing | 0.993 | D | 0.775 | deleterious | None | None | None | None | N |
F/Q | 0.8801 | likely_pathogenic | 0.9062 | pathogenic | -2.547 | Highly Destabilizing | 0.993 | D | 0.775 | deleterious | None | None | None | None | N |
F/R | 0.8777 | likely_pathogenic | 0.8897 | pathogenic | -1.405 | Destabilizing | 0.978 | D | 0.781 | deleterious | None | None | None | None | N |
F/S | 0.4571 | ambiguous | 0.5095 | ambiguous | -3.094 | Highly Destabilizing | 0.971 | D | 0.683 | prob.neutral | N | 0.439634016 | None | None | N |
F/T | 0.4966 | ambiguous | 0.588 | pathogenic | -2.855 | Highly Destabilizing | 0.956 | D | 0.668 | neutral | None | None | None | None | N |
F/V | 0.3193 | likely_benign | 0.414 | ambiguous | -2.52 | Highly Destabilizing | 0.698 | D | 0.593 | neutral | N | 0.46982085 | None | None | N |
F/W | 0.5689 | likely_pathogenic | 0.6071 | pathogenic | -0.807 | Destabilizing | 0.998 | D | 0.698 | prob.neutral | None | None | None | None | N |
F/Y | 0.1774 | likely_benign | 0.1943 | benign | -1.235 | Destabilizing | 0.904 | D | 0.617 | neutral | N | 0.45787306 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.