Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20350 | 61273;61274;61275 | chr2:178590677;178590676;178590675 | chr2:179455404;179455403;179455402 |
N2AB | 18709 | 56350;56351;56352 | chr2:178590677;178590676;178590675 | chr2:179455404;179455403;179455402 |
N2A | 17782 | 53569;53570;53571 | chr2:178590677;178590676;178590675 | chr2:179455404;179455403;179455402 |
N2B | 11285 | 34078;34079;34080 | chr2:178590677;178590676;178590675 | chr2:179455404;179455403;179455402 |
Novex-1 | 11410 | 34453;34454;34455 | chr2:178590677;178590676;178590675 | chr2:179455404;179455403;179455402 |
Novex-2 | 11477 | 34654;34655;34656 | chr2:178590677;178590676;178590675 | chr2:179455404;179455403;179455402 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1162158537 | -0.515 | 0.934 | N | 0.321 | 0.185 | 0.598957545849 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
L/F | rs1162158537 | -0.515 | 0.934 | N | 0.321 | 0.185 | 0.598957545849 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 3.8835E-04 | None | 0 | 0 | 0 | 0 | 0 |
L/F | rs1162158537 | -0.515 | 0.934 | N | 0.321 | 0.185 | 0.598957545849 | gnomAD-4.0.0 | 8.07759E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.45843E-03 | None | 0 | 0 | 4.79017E-06 | 0 | 2.8456E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1387 | likely_benign | 0.1678 | benign | -0.346 | Destabilizing | 0.525 | D | 0.458 | neutral | None | None | None | None | I |
L/C | 0.5226 | ambiguous | 0.6097 | pathogenic | -0.61 | Destabilizing | 0.998 | D | 0.387 | neutral | None | None | None | None | I |
L/D | 0.582 | likely_pathogenic | 0.6306 | pathogenic | -0.051 | Destabilizing | 0.949 | D | 0.471 | neutral | None | None | None | None | I |
L/E | 0.283 | likely_benign | 0.3148 | benign | -0.158 | Destabilizing | 0.949 | D | 0.467 | neutral | None | None | None | None | I |
L/F | 0.1569 | likely_benign | 0.1702 | benign | -0.549 | Destabilizing | 0.934 | D | 0.321 | neutral | N | 0.514670492 | None | None | I |
L/G | 0.4835 | ambiguous | 0.5391 | ambiguous | -0.455 | Destabilizing | 0.728 | D | 0.521 | neutral | None | None | None | None | I |
L/H | 0.2061 | likely_benign | 0.2347 | benign | 0.107 | Stabilizing | 0.997 | D | 0.427 | neutral | N | 0.476978896 | None | None | I |
L/I | 0.0813 | likely_benign | 0.0807 | benign | -0.194 | Destabilizing | 0.005 | N | 0.113 | neutral | N | 0.369851431 | None | None | I |
L/K | 0.208 | likely_benign | 0.2233 | benign | -0.135 | Destabilizing | 0.842 | D | 0.477 | neutral | None | None | None | None | I |
L/M | 0.0948 | likely_benign | 0.1047 | benign | -0.316 | Destabilizing | 0.172 | N | 0.251 | neutral | None | None | None | None | I |
L/N | 0.3385 | likely_benign | 0.367 | ambiguous | 0.035 | Stabilizing | 0.949 | D | 0.48 | neutral | None | None | None | None | I |
L/P | 0.3639 | ambiguous | 0.394 | ambiguous | -0.214 | Destabilizing | 0.966 | D | 0.472 | neutral | N | 0.447696139 | None | None | I |
L/Q | 0.1315 | likely_benign | 0.146 | benign | -0.18 | Destabilizing | 0.974 | D | 0.475 | neutral | None | None | None | None | I |
L/R | 0.168 | likely_benign | 0.1984 | benign | 0.342 | Stabilizing | 0.934 | D | 0.479 | neutral | N | 0.403827932 | None | None | I |
L/S | 0.2039 | likely_benign | 0.2333 | benign | -0.37 | Destabilizing | 0.067 | N | 0.384 | neutral | None | None | None | None | I |
L/T | 0.1567 | likely_benign | 0.1767 | benign | -0.372 | Destabilizing | 0.728 | D | 0.459 | neutral | None | None | None | None | I |
L/V | 0.0854 | likely_benign | 0.0908 | benign | -0.214 | Destabilizing | 0.267 | N | 0.273 | neutral | N | 0.423125768 | None | None | I |
L/W | 0.2753 | likely_benign | 0.3046 | benign | -0.578 | Destabilizing | 0.998 | D | 0.473 | neutral | None | None | None | None | I |
L/Y | 0.3263 | likely_benign | 0.3582 | ambiguous | -0.303 | Destabilizing | 0.974 | D | 0.406 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.