Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2035061273;61274;61275 chr2:178590677;178590676;178590675chr2:179455404;179455403;179455402
N2AB1870956350;56351;56352 chr2:178590677;178590676;178590675chr2:179455404;179455403;179455402
N2A1778253569;53570;53571 chr2:178590677;178590676;178590675chr2:179455404;179455403;179455402
N2B1128534078;34079;34080 chr2:178590677;178590676;178590675chr2:179455404;179455403;179455402
Novex-11141034453;34454;34455 chr2:178590677;178590676;178590675chr2:179455404;179455403;179455402
Novex-21147734654;34655;34656 chr2:178590677;178590676;178590675chr2:179455404;179455403;179455402
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-35
  • Domain position: 80
  • Structural Position: 113
  • Q(SASA): 1.0705
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs1162158537 -0.515 0.934 N 0.321 0.185 0.598957545849 gnomAD-2.1.1 4.02E-06 None None None None I None 0 0 None 0 5.6E-05 None 0 None 0 0 0
L/F rs1162158537 -0.515 0.934 N 0.321 0.185 0.598957545849 gnomAD-3.1.2 1.32E-05 None None None None I None 0 0 0 0 3.8835E-04 None 0 0 0 0 0
L/F rs1162158537 -0.515 0.934 N 0.321 0.185 0.598957545849 gnomAD-4.0.0 8.07759E-05 None None None None I None 0 0 None 0 1.45843E-03 None 0 0 4.79017E-06 0 2.8456E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1387 likely_benign 0.1678 benign -0.346 Destabilizing 0.525 D 0.458 neutral None None None None I
L/C 0.5226 ambiguous 0.6097 pathogenic -0.61 Destabilizing 0.998 D 0.387 neutral None None None None I
L/D 0.582 likely_pathogenic 0.6306 pathogenic -0.051 Destabilizing 0.949 D 0.471 neutral None None None None I
L/E 0.283 likely_benign 0.3148 benign -0.158 Destabilizing 0.949 D 0.467 neutral None None None None I
L/F 0.1569 likely_benign 0.1702 benign -0.549 Destabilizing 0.934 D 0.321 neutral N 0.514670492 None None I
L/G 0.4835 ambiguous 0.5391 ambiguous -0.455 Destabilizing 0.728 D 0.521 neutral None None None None I
L/H 0.2061 likely_benign 0.2347 benign 0.107 Stabilizing 0.997 D 0.427 neutral N 0.476978896 None None I
L/I 0.0813 likely_benign 0.0807 benign -0.194 Destabilizing 0.005 N 0.113 neutral N 0.369851431 None None I
L/K 0.208 likely_benign 0.2233 benign -0.135 Destabilizing 0.842 D 0.477 neutral None None None None I
L/M 0.0948 likely_benign 0.1047 benign -0.316 Destabilizing 0.172 N 0.251 neutral None None None None I
L/N 0.3385 likely_benign 0.367 ambiguous 0.035 Stabilizing 0.949 D 0.48 neutral None None None None I
L/P 0.3639 ambiguous 0.394 ambiguous -0.214 Destabilizing 0.966 D 0.472 neutral N 0.447696139 None None I
L/Q 0.1315 likely_benign 0.146 benign -0.18 Destabilizing 0.974 D 0.475 neutral None None None None I
L/R 0.168 likely_benign 0.1984 benign 0.342 Stabilizing 0.934 D 0.479 neutral N 0.403827932 None None I
L/S 0.2039 likely_benign 0.2333 benign -0.37 Destabilizing 0.067 N 0.384 neutral None None None None I
L/T 0.1567 likely_benign 0.1767 benign -0.372 Destabilizing 0.728 D 0.459 neutral None None None None I
L/V 0.0854 likely_benign 0.0908 benign -0.214 Destabilizing 0.267 N 0.273 neutral N 0.423125768 None None I
L/W 0.2753 likely_benign 0.3046 benign -0.578 Destabilizing 0.998 D 0.473 neutral None None None None I
L/Y 0.3263 likely_benign 0.3582 ambiguous -0.303 Destabilizing 0.974 D 0.406 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.