Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20396 | 61411;61412;61413 | chr2:178590539;178590538;178590537 | chr2:179455266;179455265;179455264 |
N2AB | 18755 | 56488;56489;56490 | chr2:178590539;178590538;178590537 | chr2:179455266;179455265;179455264 |
N2A | 17828 | 53707;53708;53709 | chr2:178590539;178590538;178590537 | chr2:179455266;179455265;179455264 |
N2B | 11331 | 34216;34217;34218 | chr2:178590539;178590538;178590537 | chr2:179455266;179455265;179455264 |
Novex-1 | 11456 | 34591;34592;34593 | chr2:178590539;178590538;178590537 | chr2:179455266;179455265;179455264 |
Novex-2 | 11523 | 34792;34793;34794 | chr2:178590539;178590538;178590537 | chr2:179455266;179455265;179455264 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.966 | N | 0.315 | 0.294 | 0.629339664297 | gnomAD-4.0.0 | 2.73823E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59914E-06 | 0 | 0 |
L/R | rs2049986459 | None | 0.934 | N | 0.323 | 0.216 | 0.57330664977 | gnomAD-4.0.0 | 1.36912E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79957E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2213 | likely_benign | 0.1769 | benign | -0.522 | Destabilizing | 0.525 | D | 0.324 | neutral | None | None | None | None | I |
L/C | 0.5988 | likely_pathogenic | 0.5552 | ambiguous | -0.857 | Destabilizing | 0.998 | D | 0.275 | neutral | None | None | None | None | I |
L/D | 0.7141 | likely_pathogenic | 0.6541 | pathogenic | -0.197 | Destabilizing | 0.728 | D | 0.336 | neutral | None | None | None | None | I |
L/E | 0.482 | ambiguous | 0.4139 | ambiguous | -0.274 | Destabilizing | 0.842 | D | 0.337 | neutral | None | None | None | None | I |
L/F | 0.235 | likely_benign | 0.1873 | benign | -0.591 | Destabilizing | 0.989 | D | 0.299 | neutral | N | 0.46599996 | None | None | I |
L/G | 0.545 | ambiguous | 0.4788 | ambiguous | -0.639 | Destabilizing | 0.728 | D | 0.336 | neutral | None | None | None | None | I |
L/H | 0.3362 | likely_benign | 0.2998 | benign | 0.086 | Stabilizing | 0.966 | D | 0.255 | neutral | N | 0.496874166 | None | None | I |
L/I | 0.1028 | likely_benign | 0.0908 | benign | -0.326 | Destabilizing | 0.801 | D | 0.319 | neutral | N | 0.440116806 | None | None | I |
L/K | 0.3828 | ambiguous | 0.3624 | ambiguous | -0.374 | Destabilizing | 0.842 | D | 0.34 | neutral | None | None | None | None | I |
L/M | 0.1334 | likely_benign | 0.1214 | benign | -0.667 | Destabilizing | 0.991 | D | 0.316 | neutral | None | None | None | None | I |
L/N | 0.3095 | likely_benign | 0.2468 | benign | -0.283 | Destabilizing | 0.007 | N | 0.216 | neutral | None | None | None | None | I |
L/P | 0.2993 | likely_benign | 0.2769 | benign | -0.364 | Destabilizing | 0.966 | D | 0.315 | neutral | N | 0.476901538 | None | None | I |
L/Q | 0.2077 | likely_benign | 0.1828 | benign | -0.434 | Destabilizing | 0.974 | D | 0.327 | neutral | None | None | None | None | I |
L/R | 0.3401 | ambiguous | 0.3335 | benign | 0.085 | Stabilizing | 0.934 | D | 0.323 | neutral | N | 0.425184639 | None | None | I |
L/S | 0.2866 | likely_benign | 0.2171 | benign | -0.689 | Destabilizing | 0.172 | N | 0.236 | neutral | None | None | None | None | I |
L/T | 0.2584 | likely_benign | 0.1995 | benign | -0.661 | Destabilizing | 0.029 | N | 0.155 | neutral | None | None | None | None | I |
L/V | 0.1031 | likely_benign | 0.0908 | benign | -0.364 | Destabilizing | 0.625 | D | 0.306 | neutral | N | 0.457105056 | None | None | I |
L/W | 0.4487 | ambiguous | 0.4188 | ambiguous | -0.6 | Destabilizing | 0.998 | D | 0.325 | neutral | None | None | None | None | I |
L/Y | 0.4487 | ambiguous | 0.3899 | ambiguous | -0.38 | Destabilizing | 0.991 | D | 0.293 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.