Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20397 | 61414;61415;61416 | chr2:178590536;178590535;178590534 | chr2:179455263;179455262;179455261 |
N2AB | 18756 | 56491;56492;56493 | chr2:178590536;178590535;178590534 | chr2:179455263;179455262;179455261 |
N2A | 17829 | 53710;53711;53712 | chr2:178590536;178590535;178590534 | chr2:179455263;179455262;179455261 |
N2B | 11332 | 34219;34220;34221 | chr2:178590536;178590535;178590534 | chr2:179455263;179455262;179455261 |
Novex-1 | 11457 | 34594;34595;34596 | chr2:178590536;178590535;178590534 | chr2:179455263;179455262;179455261 |
Novex-2 | 11524 | 34795;34796;34797 | chr2:178590536;178590535;178590534 | chr2:179455263;179455262;179455261 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.425 | N | 0.271 | 0.154 | 0.141422826196 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0992 | likely_benign | 0.0909 | benign | -0.394 | Destabilizing | 0.3 | N | 0.205 | neutral | None | None | None | None | I |
S/C | 0.1006 | likely_benign | 0.0973 | benign | -0.28 | Destabilizing | 0.993 | D | 0.386 | neutral | N | 0.498036454 | None | None | I |
S/D | 0.527 | ambiguous | 0.388 | ambiguous | 0.155 | Stabilizing | 0.704 | D | 0.21 | neutral | None | None | None | None | I |
S/E | 0.6219 | likely_pathogenic | 0.4878 | ambiguous | 0.058 | Stabilizing | 0.329 | N | 0.287 | neutral | None | None | None | None | I |
S/F | 0.2339 | likely_benign | 0.2158 | benign | -1.022 | Destabilizing | 0.981 | D | 0.5 | neutral | None | None | None | None | I |
S/G | 0.1269 | likely_benign | 0.1235 | benign | -0.496 | Destabilizing | 0.425 | N | 0.271 | neutral | N | 0.46232637 | None | None | I |
S/H | 0.3132 | likely_benign | 0.2814 | benign | -1.043 | Destabilizing | 0.944 | D | 0.423 | neutral | None | None | None | None | I |
S/I | 0.21 | likely_benign | 0.1728 | benign | -0.258 | Destabilizing | 0.927 | D | 0.531 | neutral | N | 0.464673242 | None | None | I |
S/K | 0.7092 | likely_pathogenic | 0.6109 | pathogenic | -0.465 | Destabilizing | 0.001 | N | 0.067 | neutral | None | None | None | None | I |
S/L | 0.1227 | likely_benign | 0.1094 | benign | -0.258 | Destabilizing | 0.495 | N | 0.393 | neutral | None | None | None | None | I |
S/M | 0.1917 | likely_benign | 0.1692 | benign | 0.015 | Stabilizing | 0.981 | D | 0.414 | neutral | None | None | None | None | I |
S/N | 0.1437 | likely_benign | 0.1173 | benign | -0.192 | Destabilizing | 0.425 | N | 0.257 | neutral | N | 0.420247674 | None | None | I |
S/P | 0.8224 | likely_pathogenic | 0.7717 | pathogenic | -0.275 | Destabilizing | 0.828 | D | 0.475 | neutral | None | None | None | None | I |
S/Q | 0.4677 | ambiguous | 0.41 | ambiguous | -0.445 | Destabilizing | 0.704 | D | 0.219 | neutral | None | None | None | None | I |
S/R | 0.6196 | likely_pathogenic | 0.5416 | ambiguous | -0.283 | Destabilizing | 0.002 | N | 0.101 | neutral | N | 0.416458007 | None | None | I |
S/T | 0.0904 | likely_benign | 0.0819 | benign | -0.298 | Destabilizing | 0.425 | N | 0.257 | neutral | N | 0.448781069 | None | None | I |
S/V | 0.1988 | likely_benign | 0.1665 | benign | -0.275 | Destabilizing | 0.828 | D | 0.475 | neutral | None | None | None | None | I |
S/W | 0.3605 | ambiguous | 0.3305 | benign | -1.029 | Destabilizing | 0.995 | D | 0.478 | neutral | None | None | None | None | I |
S/Y | 0.1849 | likely_benign | 0.1666 | benign | -0.747 | Destabilizing | 0.981 | D | 0.495 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.