Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20417 | 61474;61475;61476 | chr2:178590476;178590475;178590474 | chr2:179455203;179455202;179455201 |
N2AB | 18776 | 56551;56552;56553 | chr2:178590476;178590475;178590474 | chr2:179455203;179455202;179455201 |
N2A | 17849 | 53770;53771;53772 | chr2:178590476;178590475;178590474 | chr2:179455203;179455202;179455201 |
N2B | 11352 | 34279;34280;34281 | chr2:178590476;178590475;178590474 | chr2:179455203;179455202;179455201 |
Novex-1 | 11477 | 34654;34655;34656 | chr2:178590476;178590475;178590474 | chr2:179455203;179455202;179455201 |
Novex-2 | 11544 | 34855;34856;34857 | chr2:178590476;178590475;178590474 | chr2:179455203;179455202;179455201 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.001 | N | 0.131 | 0.12 | 0.0920862733494 | gnomAD-4.0.0 | 1.59263E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86069E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1293 | likely_benign | 0.14 | benign | -0.302 | Destabilizing | 0.129 | N | 0.346 | neutral | None | None | None | None | N |
Q/C | 0.5532 | ambiguous | 0.6405 | pathogenic | 0.215 | Stabilizing | 0.983 | D | 0.281 | neutral | None | None | None | None | N |
Q/D | 0.2127 | likely_benign | 0.2209 | benign | 0.038 | Stabilizing | 0.001 | N | 0.123 | neutral | None | None | None | None | N |
Q/E | 0.065 | likely_benign | 0.0642 | benign | 0.024 | Stabilizing | 0.001 | N | 0.119 | neutral | N | 0.372427589 | None | None | N |
Q/F | 0.5313 | ambiguous | 0.607 | pathogenic | -0.419 | Destabilizing | 0.94 | D | 0.28 | neutral | None | None | None | None | N |
Q/G | 0.2072 | likely_benign | 0.2234 | benign | -0.516 | Destabilizing | 0.228 | N | 0.305 | neutral | None | None | None | None | N |
Q/H | 0.1748 | likely_benign | 0.2122 | benign | -0.353 | Destabilizing | 0.794 | D | 0.271 | neutral | N | 0.46732205 | None | None | N |
Q/I | 0.2228 | likely_benign | 0.2581 | benign | 0.182 | Stabilizing | 0.836 | D | 0.309 | neutral | None | None | None | None | N |
Q/K | 0.0901 | likely_benign | 0.0945 | benign | -0.003 | Destabilizing | 0.001 | N | 0.131 | neutral | N | 0.409543183 | None | None | N |
Q/L | 0.0954 | likely_benign | 0.1108 | benign | 0.182 | Stabilizing | 0.351 | N | 0.317 | neutral | N | 0.460337362 | None | None | N |
Q/M | 0.2589 | likely_benign | 0.2983 | benign | 0.431 | Stabilizing | 0.94 | D | 0.281 | neutral | None | None | None | None | N |
Q/N | 0.1867 | likely_benign | 0.2022 | benign | -0.271 | Destabilizing | 0.418 | N | 0.263 | neutral | None | None | None | None | N |
Q/P | 0.1866 | likely_benign | 0.1924 | benign | 0.049 | Stabilizing | 0.523 | D | 0.297 | neutral | N | 0.489236117 | None | None | N |
Q/R | 0.1087 | likely_benign | 0.1183 | benign | 0.172 | Stabilizing | 0.213 | N | 0.302 | neutral | N | 0.438441937 | None | None | N |
Q/S | 0.1544 | likely_benign | 0.1617 | benign | -0.303 | Destabilizing | 0.129 | N | 0.323 | neutral | None | None | None | None | N |
Q/T | 0.1221 | likely_benign | 0.1327 | benign | -0.156 | Destabilizing | 0.418 | N | 0.313 | neutral | None | None | None | None | N |
Q/V | 0.1356 | likely_benign | 0.158 | benign | 0.049 | Stabilizing | 0.418 | N | 0.308 | neutral | None | None | None | None | N |
Q/W | 0.4879 | ambiguous | 0.5675 | pathogenic | -0.383 | Destabilizing | 0.983 | D | 0.303 | neutral | None | None | None | None | N |
Q/Y | 0.3715 | ambiguous | 0.4357 | ambiguous | -0.147 | Destabilizing | 0.94 | D | 0.279 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.